RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 SHROOM1Q2M3G4 852 aaPredicted RBP14.85□□□□□ -0.03
CLK4-208ENST00000520957 RGMBQ6NW40 437 aa14.85□□□□□ -0.03
CLK4-208ENST00000520957 CTR9Q6PD62 1173 aa14.85□□□□□ -0.03
CLK4-208ENST00000520957 DYNLL2Q96FJ2 89 aa14.85□□□□□ -0.03
CLK4-208ENST00000520957 ZNF341Q9BYN7 854 aa14.85□□□□□ -0.03
CLK4-208ENST00000520957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.03
CLK4-208ENST00000520957 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.85□□□□□ -0.03
CLK4-208ENST00000520957 ZNF112Q9UJU3 913 aa14.85□□□□□ -0.03
CLK4-208ENST00000520957 FAM155AB1AL88 458 aaPredicted RBP14.84□□□□□ -0.03
CLK4-208ENST00000520957 AOC2O75106 756 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 VGLL4Q14135 290 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 DCAF15Q66K64 600 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 IFNL3Q8IZI9 196 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 STK11IPQ8N1F8 1099 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 CAPNS2Q96L46 248 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 ELP3Q9H9T3 547 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 TBC1D12O60347 775 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 METTL16Q86W50 562 aaKnown RBP14.84□□□□□ -0.03
CLK4-208ENST00000520957 FOXP4Q8IVH2 680 aaPredicted RBP14.84□□□□□ -0.03
CLK4-208ENST00000520957 ANKRD13AQ8IZ07 590 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 SLC44A5Q8NCS7 719 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 SLC10A4Q96EP9 437 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 GTF3C3Q9Y5Q9 886 aa14.84□□□□□ -0.03
CLK4-208ENST00000520957 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 GNAT2P19087 354 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 GJA5P36382 358 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 C12orf60Q5U649 245 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
CLK4-208ENST00000520957 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 HOOK2Q96ED9 719 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 HHIPL1Q96JK4 782 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 SNCAIPQ9Y6H5 919 aa14.83□□□□□ -0.04
CLK4-208ENST00000520957 HSPD1P10809 573 aaKnown RBP14.82□□□□□ -0.04
CLK4-208ENST00000520957 GABPAQ06546 454 aa14.82□□□□□ -0.04
CLK4-208ENST00000520957 RASAL3Q86YV0 1011 aa14.82□□□□□ -0.04
CLK4-208ENST00000520957 CRACR2BQ8N4Y2 399 aaPredicted RBP14.82□□□□□ -0.04
CLK4-208ENST00000520957 SERPINB13Q9UIV8 391 aa14.82□□□□□ -0.04
CLK4-208ENST00000520957 CCDC171Q6TFL3 1326 aa14.82□□□□□ -0.04
CLK4-208ENST00000520957 WDR33Q9C0J8 1336 aaKnown RBP14.82□□□□□ -0.04
CLK4-208ENST00000520957 COL2A1P02458 1487 aaPredicted RBP14.82□□□□□ -0.04
CLK4-208ENST00000520957 TRPM7Q96QT4 1865 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 HIP1O00291 1037 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 FGAP02671 866 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 TDO2P48775 406 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 INCENPQ9NQS7 918 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 HERC5Q9UII4 1024 aaKnown RBP14.81□□□□□ -0.04
CLK4-208ENST00000520957 GDF11O95390 407 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 SHMT1P34896 483 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 OPTNQ96CV9 577 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 CSADQ9Y600 493 aa14.81□□□□□ -0.04
CLK4-208ENST00000520957 PAPPA2Q9BXP8 1791 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 SLC10A3P09131 477 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 CAP2P40123 477 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 SBK1Q52WX2 424 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 SPRYD7Q5W111 196 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 NAPBQ9H115 298 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 EHD4Q9H223 541 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 TACC3Q9Y6A5 838 aa14.8□□□□□ -0.04
CLK4-208ENST00000520957 SGSM2O43147 1006 aa14.79□□□□□ -0.04
CLK4-208ENST00000520957 CTNND1O60716 968 aaKnown RBP14.79□□□□□ -0.04
CLK4-208ENST00000520957 CDK8P49336 464 aa14.79□□□□□ -0.04
CLK4-208ENST00000520957 KIF23Q02241 960 aaPredicted RBP14.79□□□□□ -0.04
CLK4-208ENST00000520957 PTH1RQ03431 593 aa14.79□□□□□ -0.04
CLK4-208ENST00000520957 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
CLK4-208ENST00000520957 NACAP1Q9BZK3 213 aa14.79□□□□□ -0.04
CLK4-208ENST00000520957 PRDM1O75626 825 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 SCYL3Q8IZE3 742 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 WNK4Q96J92 1243 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
CLK4-208ENST00000520957 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 MYH7P12883 1935 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 AK9Q5TCS8 1911 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 CDK5RAP2Q96SN8 1893 aa14.78□□□□□ -0.04
CLK4-208ENST00000520957 SPDYE5A6NIY4 337 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 UNCXA6NJT0 531 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 IRF6O14896 467 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 PTPRAP18433 802 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 ECE1P42892 770 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 HAND2P61296 217 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 PPARAQ07869 468 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 ALX1Q15699 326 aa14.77□□□□□ -0.04
CLK4-208ENST00000520957 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.04
CLK4-208ENST00000520957 NOL9Q5SY16 702 aaKnown RBP14.77□□□□□ -0.04
CLK4-208ENST00000520957 GH2P01242 217 aa14.77□□□□□ -0.05
CLK4-208ENST00000520957 C16orf86Q6ZW13 317 aa14.77□□□□□ -0.05
CLK4-208ENST00000520957 ERO1BQ86YB8 467 aa14.77□□□□□ -0.05
CLK4-208ENST00000520957 NKX2-3Q8TAU0 364 aa14.77□□□□□ -0.05
CLK4-208ENST00000520957 ESYT1Q9BSJ8 1104 aa14.77□□□□□ -0.05
CLK4-208ENST00000520957 PICK1Q9NRD5 415 aa14.77□□□□□ -0.05
CLK4-208ENST00000520957 AKR1B1P15121 316 aa14.76□□□□□ -0.05
CLK4-208ENST00000520957 GUCY1A2P33402 732 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms