RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 FAM83AQ86UY5 434 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 PTCH2Q9Y6C5 1203 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 MKI67P46013 3256 aaKnown RBP21.93■■□□□ 1.1
VEGFA-222ENST00000520948 BRCA2P51587 3418 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 AK9Q5TCS8 1911 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 FKBP1CQ5VVH2 108 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 MIGA2Q7L4E1 593 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 ERO1BQ86YB8 467 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 USP40Q9NVE5 1235 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 PCDH10Q9P2E7 1040 aa21.93■■□□□ 1.1
VEGFA-222ENST00000520948 ZNF532Q9HCE3 1301 aa21.92■■□□□ 1.1
VEGFA-222ENST00000520948 IRF6O14896 467 aa21.92■■□□□ 1.1
VEGFA-222ENST00000520948 CETPP11597 493 aa21.92■■□□□ 1.1
VEGFA-222ENST00000520948 UBE3CQ15386 1083 aa21.92■■□□□ 1.1
VEGFA-222ENST00000520948 EVI5LQ96CN4 794 aa21.92■■□□□ 1.1
VEGFA-222ENST00000520948 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.92■■□□□ 1.13e-12■□□□□ 9.3
VEGFA-222ENST00000520948 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
VEGFA-222ENST00000520948 RPAP1Q9BWH6 1393 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-222ENST00000520948 BTBD19C9JJ37 291 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 ECM2O94769 699 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-222ENST00000520948 MYCP01106 439 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-222ENST00000520948 CHGBP05060 677 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 SLFNL1Q499Z3 407 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 SLC9C1Q4G0N8 1177 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 DCAF15Q66K64 600 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 HOOK2Q96ED9 719 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 ZNF333Q96JL9 665 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 IDI2Q9BXS1 227 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 ARHGAP39Q9C0H5 1083 aa21.91■■□□□ 1.1
VEGFA-222ENST00000520948 INPP5BP32019 993 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 TCP10Q12799 353 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 PPIL2Q13356 520 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 SNAPC2Q13487 334 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 ZSCAN25Q6NSZ9 544 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 TICAM2Q86XR7 235 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 ZNF341Q9BYN7 854 aa21.9■■□□□ 1.1
VEGFA-222ENST00000520948 RFX7Q2KHR2 1363 aa21.89■■□□□ 1.1
VEGFA-222ENST00000520948 TLR2O60603 784 aa21.89■■□□□ 1.09
VEGFA-222ENST00000520948 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.09
VEGFA-222ENST00000520948 BAG3O95817 575 aa21.89■■□□□ 1.09
VEGFA-222ENST00000520948 DYNLL1P63167 89 aaKnown RBP21.89■■□□□ 1.09
VEGFA-222ENST00000520948 ARHGEF6Q15052 776 aa21.89■■□□□ 1.09
VEGFA-222ENST00000520948 TTC22Q5TAA0 569 aa21.89■■□□□ 1.09
VEGFA-222ENST00000520948 RIOK1Q9BRS2 568 aaKnown RBP21.89■■□□□ 1.09
VEGFA-222ENST00000520948 TMEM106CQ9BVX2 250 aa21.89■■□□□ 1.09
VEGFA-222ENST00000520948 AATFQ9NY61 560 aaKnown RBP eCLIP21.89■■□□□ 1.09
VEGFA-222ENST00000520948 FAM198AQ9UFP1 575 aa21.89■■□□□ 1.09
VEGFA-222ENST00000520948 RNF113AO15541 343 aaKnown RBP21.88■■□□□ 1.09
VEGFA-222ENST00000520948 NPM3O75607 178 aaKnown RBP21.88■■□□□ 1.09
VEGFA-222ENST00000520948 NFIAQ12857 509 aa21.88■■□□□ 1.09
VEGFA-222ENST00000520948 SKAP1Q86WV1 359 aa21.88■■□□□ 1.09
VEGFA-222ENST00000520948 CDK5RAP2Q96SN8 1893 aa21.88■■□□□ 1.09
VEGFA-222ENST00000520948 ZFYP08048 801 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-222ENST00000520948 GSPT1P15170 499 aaKnown RBP21.87■■□□□ 1.09
VEGFA-222ENST00000520948 PLCG2P16885 1265 aa21.87■■□□□ 1.09
VEGFA-222ENST00000520948 LACTBP83111 547 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-222ENST00000520948 CERS3Q8IU89 383 aa21.87■■□□□ 1.09
VEGFA-222ENST00000520948 MIGA1Q8NAN2 632 aa21.87■■□□□ 1.09
VEGFA-222ENST00000520948 SH3RF3Q8TEJ3 882 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-222ENST00000520948 SH3TC2Q8TF17 1288 aa21.87■■□□□ 1.09
VEGFA-222ENST00000520948 FAM151AQ8WW52 585 aa21.87■■□□□ 1.09
VEGFA-222ENST00000520948 NOL10Q9BSC4 688 aaKnown RBP21.87■■□□□ 1.09
VEGFA-222ENST00000520948 DDX4Q9NQI0 724 aaKnown RBP21.87■■□□□ 1.09
VEGFA-222ENST00000520948 FOCADQ5VW36 1801 aa21.86■■□□□ 1.09
VEGFA-222ENST00000520948 ENTPD3O75355 529 aa21.86■■□□□ 1.09
VEGFA-222ENST00000520948 KIF22Q14807 665 aa21.86■■□□□ 1.09
VEGFA-222ENST00000520948 SLC4A8Q2Y0W8 1093 aa21.86■■□□□ 1.09
VEGFA-222ENST00000520948 NBPF11Q86T75 865 aa21.86■■□□□ 1.09
VEGFA-222ENST00000520948 FSD1Q9BTV5 496 aa21.86■■□□□ 1.09
VEGFA-222ENST00000520948 PUS7LQ9H0K6 701 aaKnown RBP21.86■■□□□ 1.09
VEGFA-222ENST00000520948 ZCCHC17Q9NP64 241 aaKnown RBP21.86■■□□□ 1.09
VEGFA-222ENST00000520948 MAGEB6P1A0A0J9YX57 407 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 TRIM6-TRIM34B2RNG4 842 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 PPATQ06203 517 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 LRRFIP1Q32MZ4 808 aaKnown RBP21.85■■□□□ 1.09
VEGFA-222ENST00000520948 ZFPM1Q8IX07 1006 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 APPBP2Q92624 585 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 OSBP2Q969R2 916 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 CPA4Q9UI42 421 aa21.85■■□□□ 1.09
VEGFA-222ENST00000520948 RGS3P49796 1198 aa21.84■■□□□ 1.09
VEGFA-222ENST00000520948 ZMYM1Q5SVZ6 1142 aa21.84■■□□□ 1.09
VEGFA-222ENST00000520948 TEX11Q8IYF3 940 aa21.84■■□□□ 1.09
VEGFA-222ENST00000520948 RILPL2Q969X0 211 aa21.84■■□□□ 1.09
VEGFA-222ENST00000520948 PDHXO00330 501 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 SDSP20132 328 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 CTGFP29279 349 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 HABP4Q5JVS0 413 aaKnown RBP21.82■■□□□ 1.08
VEGFA-222ENST00000520948 SH3BP5LQ7L8J4 393 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 LCORLQ8N3X6 602 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 ARMT1Q9H993 441 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 ZNF112Q9UJU3 913 aa21.82■■□□□ 1.08
VEGFA-222ENST00000520948 C17orf99Q6UX52 265 aa21.81■■□□□ 1.08
VEGFA-222ENST00000520948 ANKRD23Q86SG2 305 aa21.81■■□□□ 1.08
VEGFA-222ENST00000520948 TGFBRAP1Q8WUH2 860 aa21.81■■□□□ 1.08
VEGFA-222ENST00000520948 SEC62Q99442 399 aaKnown RBP21.81■■□□□ 1.08
VEGFA-222ENST00000520948 KCNH4Q9UQ05 1017 aa21.81■■□□□ 1.08
VEGFA-222ENST00000520948 COL2A1P02458 1487 aaPredicted RBP21.81■■□□□ 1.08
VEGFA-222ENST00000520948 MBD4O95243 580 aa21.8■■□□□ 1.08
VEGFA-222ENST00000520948 PICALMQ13492 652 aa21.8■■□□□ 1.08
VEGFA-222ENST00000520948 STRBPQ96SI9 672 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms