RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 ZNF236Q9UL36 1845 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 DDTLA6NHG4 134 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 SEMA3EO15041 775 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 TBC1D12O60347 775 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 ZEB1P37275 1124 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 WDR63Q8IWG1 891 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 KLHDC4Q8TBB5 520 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 LRRFIP2Q9Y608 721 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 PDS5AQ29RF7 1337 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-215ENST00000519309 NCOR1O75376 2440 aa10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 EYA2O00167 538 aa10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 RFX5P48382 616 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 PABPC4Q13310 644 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 SLC4A10Q6U841 1118 aa10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 OSBPL5Q9H0X9 879 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 DDX4Q9NQI0 724 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 PRDM6Q9NQX0 595 aa10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-215ENST00000519309 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 ATG9AQ7Z3C6 839 aa10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 CCDC84Q86UT8 332 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 ASCC2Q9H1I8 757 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 DENND2AQ9ULE3 1009 aa10.5□□□□□ -0.73
CTNNA1-215ENST00000519309 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 MDM2Q00987 491 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 ZNF697Q5TEC3 545 aa10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 LHX8Q68G74 356 aa10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 ZSCAN29Q8IWY8 852 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 ZGPATQ8N5A5 531 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 USP6NLQ92738 828 aa10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 GNL3LQ9NVN8 582 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
CTNNA1-215ENST00000519309 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 PHKA1P46020 1223 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 HMGCS2P54868 508 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 RHBDL3P58872 404 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 SPP2Q13103 211 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 ATP2B3Q16720 1220 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 MAFAQ8NHW3 353 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 APBA2Q99767 749 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
CTNNA1-215ENST00000519309 A0A0G2JMZ2 1700 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 CIAO1O76071 339 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 MAP4K4O95819 1239 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 CYP2B6P20813 491 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 MAPK4P31152 587 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 HOXA7P31268 230 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 CAP2P40123 477 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 BTDP43251 543 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 DZIP1Q86YF9 867 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 PTPRCP08575 1304 aa10.47□□□□□ -0.73
CTNNA1-215ENST00000519309 GPR75-ASB3A0A0A6YYF3 556 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 FAM196BA6NMK8 535 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 CCND3P30281 292 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 IRX3P78415 501 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 PICALMQ13492 652 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 RASGRF1Q13972 1273 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 PDE3AQ14432 1141 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 MORN1Q5T089 497 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 GTF3C2Q8WUA4 911 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 CDX2Q99626 313 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 WDR18Q9BV38 432 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 USP44Q9H0E7 712 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.46□□□□□ -0.732e-13■■■□□ 15
CTNNA1-215ENST00000519309 AS3MTQ9HBK9 375 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.73
CTNNA1-215ENST00000519309 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 RGS2P41220 211 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 HERVK_113P62684 666 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 CCDC102BQ68D86 513 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 GPRC5AQ8NFJ5 357 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 ZNF384Q8TF68 577 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 FAM161BQ96MY7 647 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 LBHD1Q9BQE6 289 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 HERC5Q9UII4 1024 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 BDP1A6H8Y1 2624 aa10.45□□□□□ -0.74
CTNNA1-215ENST00000519309 MSCO60682 206 aa10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 BACE1P56817 501 aa10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 ERVK-24P63145 666 aa10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 SMAD3P84022 425 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 MTMR2Q13614 643 aa10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 RRP1BQ14684 758 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 CCL14Q16627 93 aa10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 SPTY2D1Q68D10 685 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-215ENST00000519309 GPR142Q7Z601 462 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms