RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 CNKSR2Q8WXI2 1034 aa24.62■■□□□ 1.53
TNFRSF10B-204ENST00000519028 STRBPQ96SI9 672 aaKnown RBP24.62■■□□□ 1.53
TNFRSF10B-204ENST00000519028 HERC5Q9UII4 1024 aaKnown RBP24.62■■□□□ 1.53
TNFRSF10B-204ENST00000519028 SIPA1L1O43166 1804 aa24.62■■□□□ 1.53
TNFRSF10B-204ENST00000519028 ERO1BQ86YB8 467 aa24.61■■□□□ 1.53
TNFRSF10B-204ENST00000519028 REM2Q8IYK8 340 aaPredicted RBP24.61■■□□□ 1.53
TNFRSF10B-204ENST00000519028 ATP8A2Q9NTI2 1148 aa24.61■■□□□ 1.53
TNFRSF10B-204ENST00000519028 SPDYE5A6NIY4 337 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 CTNND1O60716 968 aaKnown RBP24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 NEFLP07196 543 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 TM4SF4P48230 202 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 SLC4A8Q2Y0W8 1093 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 ZMYM1Q5SVZ6 1142 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 TICAM2Q86XR7 235 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 SEC62Q99442 399 aaKnown RBP24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 DNAJC18Q9H819 358 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 SLC4A4Q9Y6R1 1079 aa24.6■■□□□ 1.53
TNFRSF10B-204ENST00000519028 TRIM6-TRIM34B2RNG4 842 aa24.59■■□□□ 1.53
TNFRSF10B-204ENST00000519028 M0R2C6 588 aa24.59■■□□□ 1.53
TNFRSF10B-204ENST00000519028 HLA-DOAP06340 250 aa24.59■■□□□ 1.53
TNFRSF10B-204ENST00000519028 PLCD1P51178 756 aa24.59■■□□□ 1.53
TNFRSF10B-204ENST00000519028 TTC6Q86TZ1 520 aa24.59■■□□□ 1.53
TNFRSF10B-204ENST00000519028 MCM9Q9NXL9 1143 aa24.59■■□□□ 1.53
TNFRSF10B-204ENST00000519028 RRP1BQ14684 758 aaKnown RBP24.58■■□□□ 1.53
TNFRSF10B-204ENST00000519028 CENPQQ7L2Z9 268 aaPredicted RBP24.58■■□□□ 1.53
TNFRSF10B-204ENST00000519028 SCYL3Q8IZE3 742 aa24.58■■□□□ 1.53
TNFRSF10B-204ENST00000519028 RILPL2Q969X0 211 aa24.58■■□□□ 1.53
TNFRSF10B-204ENST00000519028 OTUD5Q96G74 571 aa24.58■■□□□ 1.53
TNFRSF10B-204ENST00000519028 DDX60LQ5H9U9 1706 aaKnown RBP24.58■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GPAA1O43292 621 aa24.57■■□□□ 1.52
TNFRSF10B-204ENST00000519028 POLR3DP05423 398 aaPredicted RBP24.57■■□□□ 1.52
TNFRSF10B-204ENST00000519028 PPATQ06203 517 aa24.57■■□□□ 1.52
TNFRSF10B-204ENST00000519028 MS4A4AQ96JQ5 239 aa24.57■■□□□ 1.52
TNFRSF10B-204ENST00000519028 EHD4Q9H223 541 aa24.57■■□□□ 1.52
TNFRSF10B-204ENST00000519028 NAV1Q8NEY1 1877 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 MANSC4A6NHS7 340 aaPredicted RBP24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GSG1L2A8MUP6 293 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 FOXN1O15353 648 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 INHBEP58166 350 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 EVX2Q03828 476 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 CRACR2BQ8N4Y2 399 aaPredicted RBP24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 BEGAINQ9BUH8 593 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 SERPINB13Q9UIV8 391 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 LAMB1P07942 1786 aa24.56■■□□□ 1.52
TNFRSF10B-204ENST00000519028 IRF6O14896 467 aa24.55■■□□□ 1.52
TNFRSF10B-204ENST00000519028 PTPRAP18433 802 aa24.55■■□□□ 1.52
TNFRSF10B-204ENST00000519028 CAP2P40123 477 aa24.55■■□□□ 1.52
TNFRSF10B-204ENST00000519028 SREBF2Q12772 1141 aa24.55■■□□□ 1.52
TNFRSF10B-204ENST00000519028 PPIL2Q13356 520 aa24.55■■□□□ 1.52
TNFRSF10B-204ENST00000519028 RNF186Q9NXI6 227 aa24.55■■□□□ 1.52
TNFRSF10B-204ENST00000519028 TESPA1A2RU30 521 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 CYP2D6P10635 497 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GNAT2P19087 354 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 TTC22Q5TAA0 569 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 ERICH6BQ5W0A0 696 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 TATDN1Q6P1N9 297 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 CCDC136Q96JN2 1154 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 TRIM34Q9BYJ4 488 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 PICK1Q9NRD5 415 aa24.54■■□□□ 1.52
TNFRSF10B-204ENST00000519028 BAZ2AQ9UIF9 1905 aaKnown RBP24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 PATL2C9JE40 543 aaKnown RBP24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 USP17L12C9JPN9 530 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 USP17L21D6R901 530 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GTF2A2P52657 109 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GABPAQ06546 454 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GIMAP6Q6P9H5 292 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 CTR9Q6PD62 1173 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 HELLSQ9NRZ9 838 aa24.53■■□□□ 1.52
TNFRSF10B-204ENST00000519028 CA12O43570 354 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 GSPT1P15170 499 aaKnown RBP24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 SDSP20132 328 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 JAG1P78504 1218 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 C12orf60Q5U649 245 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 DDRGK1Q96HY6 314 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 FAM227BQ96M60 508 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 PTPN18Q99952 460 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 KCNH4Q9UQ05 1017 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 ZHX2Q9Y6X8 837 aa24.52■■□□□ 1.52
TNFRSF10B-204ENST00000519028 DOCK1Q14185 1865 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 SMIM22K7EJ46 135 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 TRPA1O75762 1119 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 CCDC129Q6ZRS4 1044 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 IFNL1Q8IU54 200 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 SAGE1Q9NXZ1 904 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 AFG3L2Q9Y4W6 797 aa24.51■■□□□ 1.51
TNFRSF10B-204ENST00000519028 CYP2D7A0A087X1C5 515 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 A0A0D9SFI3 127 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 IGF2BP3O00425 579 aaKnown RBP eCLIP24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 SHMT1P34896 483 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 CTCFP49711 727 aaPredicted RBP24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 SNAPC2Q13487 334 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 MCMDC2Q4G0Z9 681 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 IFNL3Q8IZI9 196 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 BRI3BPQ8WY22 251 aa24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 EPB41L4AQ9HCS5 686 aaPredicted RBP24.5■■□□□ 1.51
TNFRSF10B-204ENST00000519028 CCL15-CCL14A0A0B4J2E2 113 aa24.49■■□□□ 1.51
TNFRSF10B-204ENST00000519028 HSPA8P11142 646 aaKnown RBP24.49■■□□□ 1.51
TNFRSF10B-204ENST00000519028 CCL15Q16663 113 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms