RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 TDHQ8IZJ6 230 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 ZNF280CQ8ND82 737 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 OGDHLQ9ULD0 1010 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 MROH7-TTC4A0A0A0MT08 1334 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 DOCK3Q8IZD9 2030 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 GPR75-ASB3A0A0A6YYF3 556 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 MAGEA10P43363 369 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 SPP2Q13103 211 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 C11orf49Q9H6J7 331 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 MORF4L1Q9UBU8 362 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
TRAPPC9-204ENST00000518723 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.05
TRAPPC9-204ENST00000518723 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.05
TRAPPC9-204ENST00000518723 UBTFL1P0CB47 393 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 ADORA1P30542 326 aa15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 TRIM32Q13049 653 aa15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 SH3D19Q5HYK7 790 aa15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 Q7L0L9 218 aa15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 ASCC2Q9H1I8 757 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
TRAPPC9-204ENST00000518723 SYN1P17600 705 aa15.32■□□□□ 0.04
TRAPPC9-204ENST00000518723 CAP2P40123 477 aa15.32■□□□□ 0.04
TRAPPC9-204ENST00000518723 HMGCS2P54868 508 aa15.32■□□□□ 0.04
TRAPPC9-204ENST00000518723 MECOMQ03112 1051 aa15.32■□□□□ 0.04
TRAPPC9-204ENST00000518723 TRIB2Q92519 343 aa15.32■□□□□ 0.04
TRAPPC9-204ENST00000518723 COPRSQ9NQ92 184 aa15.32■□□□□ 0.04
TRAPPC9-204ENST00000518723 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
TRAPPC9-204ENST00000518723 USP17L5A8MUK1 530 aa15.31■□□□□ 0.04
TRAPPC9-204ENST00000518723 XRCC5P13010 732 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-204ENST00000518723 ZNF384Q8TF68 577 aa15.31■□□□□ 0.04
TRAPPC9-204ENST00000518723 PFASO15067 1338 aa15.31■□□□□ 0.04
TRAPPC9-204ENST00000518723 ANP32CO43423 234 aa15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 COL6A1P12109 1028 aa15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 TRMT44Q8IYL2 757 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 UBE2OQ9C0C9 1292 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 HERC5Q9UII4 1024 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 PA2G4Q9UQ80 394 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
TRAPPC9-204ENST00000518723 LAMA2P24043 3122 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 E9PSI1 815 aa15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 TIMM10P62072 90 aa15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 GSTO1P78417 241 aa15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 NUDT12Q9BQG2 462 aa15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 WDR18Q9BV38 432 aa15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 AS3MTQ9HBK9 375 aa15.29■□□□□ 0.04
TRAPPC9-204ENST00000518723 A0A1B0GUL7 405 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 LDHCP07864 332 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 CYP2B6P20813 491 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 BACE1P56817 501 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 IRX3P78415 501 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 NSUN4Q96CB9 384 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 AKAP2Q9Y2D5 859 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 PLXNB2O15031 1838 aa15.28■□□□□ 0.04
TRAPPC9-204ENST00000518723 MAPK4P31152 587 aa15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 USP6NLQ92738 828 aa15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 TXNRD2Q9NNW7 524 aa15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.04
TRAPPC9-204ENST00000518723 VCANP13611 3396 aa15.27■□□□□ 0.03
TRAPPC9-204ENST00000518723 ASNSP08243 561 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 ZKSCAN1P17029 563 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 HERVK_113P62684 666 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 MTMR2Q13614 643 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 LHX8Q68G74 356 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 DHX36Q9H2U1 1008 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 SMC4Q9NTJ3 1288 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
TRAPPC9-204ENST00000518723 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 POTEB2H3BUK9 544 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 TFCP2Q12800 502 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 PDE3AQ14432 1141 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 LRRC26Q2I0M4 334 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 TEX11Q8IYF3 940 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 GTF3C2Q8WUA4 911 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 COL25A1Q9BXS0 654 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 RBPJLQ9UBG7 517 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
TRAPPC9-204ENST00000518723 RGS2P41220 211 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms