RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 AS3MTQ9HBK9 375 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 CWC22Q9HCG8 908 aaKnown RBP11.1□□□□□ -0.63
PVT1-207ENST00000518528 TMOD4Q9NZQ9 345 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
PVT1-207ENST00000518528 RGS2P41220 211 aa11.09□□□□□ -0.63
PVT1-207ENST00000518528 ANKRD44Q8N8A2 993 aa11.09□□□□□ -0.63
PVT1-207ENST00000518528 GTF3C2Q8WUA4 911 aaPredicted RBP11.09□□□□□ -0.63
PVT1-207ENST00000518528 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
PVT1-207ENST00000518528 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
PVT1-207ENST00000518528 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
PVT1-207ENST00000518528 MAP4K4O95819 1239 aaPredicted RBP11.08□□□□□ -0.64
PVT1-207ENST00000518528 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
PVT1-207ENST00000518528 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
PVT1-207ENST00000518528 MFSD14CQ5VZR4 134 aa11.08□□□□□ -0.64
PVT1-207ENST00000518528 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
PVT1-207ENST00000518528 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
PVT1-207ENST00000518528 KLHDC4Q8TBB5 520 aa11.08□□□□□ -0.64
PVT1-207ENST00000518528 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
PVT1-207ENST00000518528 GAKO14976 1311 aa11.08□□□□□ -0.64
PVT1-207ENST00000518528 MSCO60682 206 aa11.07□□□□□ -0.64
PVT1-207ENST00000518528 NPM3O75607 178 aaKnown RBP11.07□□□□□ -0.64
PVT1-207ENST00000518528 GLRX3O76003 335 aaKnown RBP11.07□□□□□ -0.64
PVT1-207ENST00000518528 BTDP43251 543 aa11.07□□□□□ -0.64
PVT1-207ENST00000518528 SH3D19Q5HYK7 790 aa11.07□□□□□ -0.64
PVT1-207ENST00000518528 SENP6Q9GZR1 1112 aaPredicted RBP11.07□□□□□ -0.64
PVT1-207ENST00000518528 SEMA6BQ9H3T3 888 aa11.07□□□□□ -0.64
PVT1-207ENST00000518528 ABCF2Q9UG63 623 aa11.07□□□□□ -0.64
PVT1-207ENST00000518528 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
PVT1-207ENST00000518528 LDHCP07864 332 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 FOSL2P15408 326 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
PVT1-207ENST00000518528 CAP2P40123 477 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 GSTO1P78417 241 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 LHX8Q68G74 356 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 PLEKHH3Q7Z736 793 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 APBA2Q99767 749 aa11.06□□□□□ -0.64
PVT1-207ENST00000518528 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.06□□□□□ -0.64
PVT1-207ENST00000518528 A0A1B0GUL6 1792 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 C19orf81C9J6K1 198 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 ZBTB22O15209 634 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 CIAO1O76071 339 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
PVT1-207ENST00000518528 BACE1P56817 501 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 HERVK_113P62684 666 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 CCNA1P78396 465 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 SMAD3P84022 425 aaKnown RBP11.05□□□□□ -0.64
PVT1-207ENST00000518528 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
PVT1-207ENST00000518528 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 DDX4Q9NQI0 724 aaKnown RBP11.05□□□□□ -0.64
PVT1-207ENST00000518528 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
PVT1-207ENST00000518528 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
PVT1-207ENST00000518528 MROH7-TTC4A0A0A0MT08 1334 aa11.05□□□□□ -0.64
PVT1-207ENST00000518528 RFX7Q2KHR2 1363 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 ASNSP08243 561 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 COL9A1P20849 921 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 PHKA1P46020 1223 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 ATN1P54259 1190 aaPredicted RBP11.04□□□□□ -0.64
PVT1-207ENST00000518528 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 ERVK-24P63145 666 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 MTMR2Q13614 643 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 ERICH6Q7L0X2 663 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 GPR142Q7Z601 462 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 MYLIPQ8WY64 445 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 GINM1Q9NU53 330 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
PVT1-207ENST00000518528 PDS5AQ29RF7 1337 aaKnown RBP11.04□□□□□ -0.64
PVT1-207ENST00000518528 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 TMEM265A0A087WTH1 108 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 GPR75-ASB3A0A0A6YYF3 556 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 FAM196BA6NMK8 535 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 DNM1LO00429 736 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 CNGA1P29973 690 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 IL15P40933 162 aaPredicted RBP11.03□□□□□ -0.64
PVT1-207ENST00000518528 RTP1P59025 263 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 MAP2K5Q13163 448 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 MORN1Q5T089 497 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 ATG9AQ7Z3C6 839 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 ARRDC4Q8NCT1 418 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 LPAR1Q92633 364 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 USP6NLQ92738 828 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 EDC3Q96F86 508 aaKnown RBP11.03□□□□□ -0.64
PVT1-207ENST00000518528 NOL10Q9BSC4 688 aaKnown RBP11.03□□□□□ -0.64
PVT1-207ENST00000518528 PAGR1Q9BTK6 254 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 SIL1Q9H173 461 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 PRDM5Q9NQX1 630 aaPredicted RBP11.03□□□□□ -0.64
PVT1-207ENST00000518528 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
PVT1-207ENST00000518528 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 MGAMO43451 1857 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 PTPRCP08575 1304 aa11.03□□□□□ -0.64
PVT1-207ENST00000518528 COL2A1P02458 1487 aaPredicted RBP11.02□□□□□ -0.65
PVT1-207ENST00000518528 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
PVT1-207ENST00000518528 KBTBD13C9JR72 458 aa11.02□□□□□ -0.65
PVT1-207ENST00000518528 RFX5P48382 616 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms