RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PRKCZQ05513 592 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 PI16Q6UXB8 463 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 NSUN4Q96CB9 384 aaKnown RBP12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 GABRQQ9UN88 632 aa12.97□□□□□ -0.33
PDGFRB-203ENST00000517660 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 CETPP11597 493 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 INPP5BP32019 993 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 PPATQ06203 517 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 PPIL2Q13356 520 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 ZNF384Q8TF68 577 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 RCAN3Q9UKA8 241 aa12.96□□□□□ -0.33
PDGFRB-203ENST00000517660 COL2A1P02458 1487 aaPredicted RBP12.96□□□□□ -0.34
PDGFRB-203ENST00000517660 IRF6O14896 467 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 IGSF3O75054 1194 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 SYN1P17600 705 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 RHBDL3P58872 404 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 SNAPC2Q13487 334 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 NOL9Q5SY16 702 aaKnown RBP12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 ZSCAN29Q8IWY8 852 aaPredicted RBP12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 SNRKQ9NRH2 765 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 DDX19BQ9UMR2 479 aa12.95□□□□□ -0.34
PDGFRB-203ENST00000517660 UBXN2AP68543 259 aa12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 MAP3K10Q02779 954 aa12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 PICALMQ13492 652 aa12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 RPAP2Q8IXW5 612 aaPredicted RBP12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 CCDC8Q9H0W5 538 aaPredicted RBP12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 PAK6Q9NQU5 681 aaPredicted RBP12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
PDGFRB-203ENST00000517660 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 MOGSQ13724 837 aa12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 NOL10Q9BSC4 688 aaKnown RBP12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 EXOC6BQ9Y2D4 811 aa12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 RFX7Q2KHR2 1363 aa12.93□□□□□ -0.34
PDGFRB-203ENST00000517660 PHF20L1A8MW92 1017 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 HMMRO75330 724 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 BAG3O95817 575 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 INHAP05111 366 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 ELNP15502 786 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 ZAP70P43403 619 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 FAM161BQ96MY7 647 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 KCNH4Q9UQ05 1017 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 ATRNL1Q5VV63 1379 aa12.92□□□□□ -0.34
PDGFRB-203ENST00000517660 CXCL11O14625 94 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 TBC1D12O60347 775 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 CTNND1O60716 968 aaKnown RBP12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 BCRP11274 1271 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 PLCG2P16885 1265 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 HOXD10P28358 340 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 PLA2G5P39877 138 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 PPP4CP60510 307 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 AACSQ86V21 672 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 TEX11Q8IYF3 940 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
PDGFRB-203ENST00000517660 ADCY3O60266 1144 aa12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 PTPRAP18433 802 aa12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 SH3RF3Q8TEJ3 882 aaPredicted RBP12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 ZHX2Q9Y6X8 837 aa12.9□□□□□ -0.34
PDGFRB-203ENST00000517660 PDHXO00330 501 aa12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms