RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 SLC12A7Q9Y666 1083 aa6.35□□□□□ -1.39
SCARNA20.4-201ENST00000516969 ELP1O95163 1332 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 ERICH2A1L162 156 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 CCDC69A6NI79 296 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 CPLX1O14810 134 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 RANBP6O60518 1105 aaKnown RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 GADD45BO75293 160 aaPredicted RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 CDKL5O76039 1030 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 MBD3O95983 291 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 IFNAR1P17181 557 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 PLCD1P51178 756 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 KIAA2012Q0VF49 1180 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 FOXD4L6Q3SYB3 417 aaPredicted RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 ATL3Q6DD88 541 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 FOXD4L3Q6VB84 417 aaPredicted RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 SYNE3Q6ZMZ3 975 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 NFXL1Q6ZNB6 911 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 NBPF11Q86T75 865 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 FERMT3Q86UX7 667 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 IQCA1Q86XH1 822 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 ZNF654Q8IZM8 581 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 STK11IPQ8N1F8 1099 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 TTLL6Q8N841 843 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 FANCBQ8NB91 859 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 SUPT20HQ8NEM7 779 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 FBXO18Q8NFZ0 1043 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 PSMD1Q99460 953 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 UBAC1Q9BSL1 405 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 MXD3Q9BW11 206 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 GDPD2Q9HCC8 539 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 TCP11L1Q9NUJ3 509 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 ORC3Q9UBD5 711 aaPredicted RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 GOLGB1Q14789 3259 aaKnown RBP6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 FER1L6Q2WGJ9 1857 aa6.34□□□□□ -1.39
SCARNA20.4-201ENST00000516969 TNKSO95271 1327 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FLT1P17948 1338 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 STK36Q9NRP7 1315 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CCDC196A0A1B0GTZ2 297 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 GOLGA8AA7E2F4 631 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 G3V3G9 751 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 H3BQV1 296 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ECE2O60344 883 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PRDM1O75626 825 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FMNL1O95466 1100 aaPredicted RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DPEP1P16444 411 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 RXRAP19793 462 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ZNF445P59923 1031 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TGFB2P61812 414 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 UBE2HP62256 183 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 KRT85P78386 507 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FUT2Q10981 343 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TROAPQ12815 778 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 RTN1Q16799 776 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CCDC178Q5BJE1 867 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DACT2Q5SW24 774 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DCAF8Q5TAQ9 597 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 IFFO2Q5TF58 517 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 RCSD1Q6JBY9 416 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 APOBEC3HQ6NTF7 200 aaKnown RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FAM173BQ6P4H8 233 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CPLX2Q6PUV4 134 aaKnown RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 C16orf86Q6ZW13 317 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ILDR1Q86SU0 546 aaPredicted RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MICU3Q86XE3 530 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TEX11Q8IYF3 940 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CRACR2BQ8N4Y2 399 aaPredicted RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 C8orf76Q96K31 380 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ZDHHC15Q96MV8 337 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MYL10Q9BUA6 226 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SCAND2PQ9GZW5 306 aaPredicted RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 VPS33BQ9H267 617 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DBNDD1Q9H9R9 158 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 IL17RBQ9NRM6 502 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ISY1Q9ULR0 285 aaKnown RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ADAMTSL1Q8N6G6 1762 aa6.33□□□□□ -1.4
SCARNA20.4-201ENST00000516969 YDJCA8MPS7 323 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FIBPO43427 364 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 C21orf2O43822 256 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 NMT2O60551 498 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PPFIA3O75145 1194 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 NPM3O75607 178 aaKnown RBP6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 WDHD1O75717 1129 aaPredicted RBP6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DDAH1O94760 285 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 POLR3DP05423 398 aaPredicted RBP6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CALM1P0DP23 149 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CALM2P0DP24 149 aa6.32□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CALM3P0DP25 149 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms