RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 DIEXFQ68CQ4 756 aaKnown RBP9.5□□□□□ -0.89
ATR-209ENST00000515810 OVOS1Q6IE37 1185 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 NOP9Q86U38 636 aaKnown RBP9.5□□□□□ -0.89
ATR-209ENST00000515810 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 CRIM1Q9NZV1 1036 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 CCDC85CA6NKD9 419 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 ALX3O95076 343 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 PGRP06401 933 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 ACRP10323 421 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 IMPDH2P12268 514 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 ZYXQ15942 572 aaKnown RBP9.49□□□□□ -0.89
ATR-209ENST00000515810 ZBTB37Q5TC79 503 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 BEND7Q8N7W2 519 aaPredicted RBP9.49□□□□□ -0.89
ATR-209ENST00000515810 ACSF2Q96CM8 615 aaPredicted RBP9.49□□□□□ -0.89
ATR-209ENST00000515810 ATG4CQ96DT6 458 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 FANCD2OSQ96PS1 177 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 FBRSQ9HAH7 460 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 ACTR10Q9NZ32 417 aa9.49□□□□□ -0.89
ATR-209ENST00000515810 A0A1W2PQH9 124 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 FAM86C2PA6NEL3 165 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 MEIS3P2A8K0S8 358 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 B2RBV5 119 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 RBAK-RBAKDNI3L0D1 243 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 GNB5O14775 395 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 NEFMP07197 916 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 ERVK-24P63145 666 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 TRIM28Q13263 835 aaKnown RBP9.48□□□□□ -0.89
ATR-209ENST00000515810 TNNI3KQ59H18 835 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 ZNF746Q6NUN9 644 aaPredicted RBP9.48□□□□□ -0.89
ATR-209ENST00000515810 JAZF1Q86VZ6 243 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 TMEM40Q8WWA1 233 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 WNT10AQ9GZT5 417 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 SIRPGQ9P1W8 387 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 TJP2Q9UDY2 1190 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 KLHL3Q9UH77 587 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 AP4E1Q9UPM8 1137 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 CADPSQ9ULU8 1353 aa9.48□□□□□ -0.89
ATR-209ENST00000515810 MEGF11A6BM72 1044 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 ADH5P11766 374 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 ETF1P62495 437 aaKnown RBP9.47□□□□□ -0.89
ATR-209ENST00000515810 RASA3Q14644 834 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 TMEM201Q5SNT2 666 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 LARP1BQ659C4 914 aaKnown RBP9.47□□□□□ -0.89
ATR-209ENST00000515810 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.47□□□□□ -0.89
ATR-209ENST00000515810 TTC6Q86TZ1 520 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 SRPK1Q96SB4 655 aaKnown RBP9.47□□□□□ -0.89
ATR-209ENST00000515810 SNTG2Q9NY99 539 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
ATR-209ENST00000515810 TBX22Q9Y458 520 aa9.47□□□□□ -0.89
ATR-209ENST00000515810 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.9
ATR-209ENST00000515810 POLR2BP30876 1174 aaKnown RBP9.46□□□□□ -0.9
ATR-209ENST00000515810 CASP7P55210 303 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 TTLL4Q14679 1199 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 NKG7Q16617 165 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 ARSHQ5FYA8 562 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 PODNQ7Z5L7 613 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 NLGN1Q8N2Q7 840 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 SCARF2Q96GP6 870 aaPredicted RBP9.46□□□□□ -0.9
ATR-209ENST00000515810 SLC9A7Q96T83 725 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 GMIPQ9P107 970 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 SYNGAP1Q96PV0 1343 aa9.46□□□□□ -0.9
ATR-209ENST00000515810 TLDC2A0PJX2 215 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 TIAF1O95411 115 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 ELNP15502 786 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 NME1P15531 152 aaKnown RBP9.45□□□□□ -0.9
ATR-209ENST00000515810 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 SOX4Q06945 474 aaPredicted RBP9.45□□□□□ -0.9
ATR-209ENST00000515810 PDE4BQ07343 736 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 DDR2Q16832 855 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
ATR-209ENST00000515810 SMG8Q8ND04 991 aaKnown RBP9.45□□□□□ -0.9
ATR-209ENST00000515810 DPH2Q9BQC3 489 aaPredicted RBP9.45□□□□□ -0.9
ATR-209ENST00000515810 RNF208Q9H0X6 261 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 PICK1Q9NRD5 415 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 LTBP3Q9NS15 1303 aa9.45□□□□□ -0.9
ATR-209ENST00000515810 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
ATR-209ENST00000515810 NLRC3Q7RTR2 1065 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
ATR-209ENST00000515810 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 MKL1Q969V6 931 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 TM9SF2Q99805 663 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 CNNM2Q9H8M5 875 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 SUGCTQ9HAC7 445 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 PCDHB10Q9UN67 800 aa9.44□□□□□ -0.9
ATR-209ENST00000515810 MRPL42Q9Y6G3 142 aaKnown RBP9.44□□□□□ -0.9
ATR-209ENST00000515810 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
ATR-209ENST00000515810 FANCGO15287 622 aa9.43□□□□□ -0.9
ATR-209ENST00000515810 GJB6O95452 261 aa9.43□□□□□ -0.9
ATR-209ENST00000515810 COL8A1P27658 744 aa9.43□□□□□ -0.9
ATR-209ENST00000515810 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms