RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 HTR3BO95264 441 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 HCLS1P14317 486 aaPredicted RBP8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 GRK4P32298 578 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 ASPAP45381 313 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 COL9A2Q14055 689 aaPredicted RBP8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 DIEXFQ68CQ4 756 aaKnown RBP8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 CDPF1Q6NVV7 123 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 CCDC81Q6ZN84 652 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 VPS37DQ86XT2 251 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 REXO1Q8N1G1 1221 aaKnown RBP8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 ARMC10Q8N2F6 343 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 RNF214Q8ND24 703 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 SSBP4Q9BWG4 385 aaPredicted RBP8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 TANGO6Q9C0B7 1094 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 WNT10AQ9GZT5 417 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 EHMT1Q9H9B1 1298 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
HMGCS1-207ENST00000514610 FANCGO15287 622 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 DNAJA2O60884 412 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 ATE1O95260 518 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 IGHA1P01876 353 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 ZNF165P49910 485 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 ISL2Q96A47 359 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 FBRSQ9HAH7 460 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 ZNRF3Q9ULT6 936 aa8.17□□□□□ -1.1
HMGCS1-207ENST00000514610 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
HMGCS1-207ENST00000514610 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
HMGCS1-207ENST00000514610 ACSS3Q9H6R3 686 aa8.16□□□□□ -1.1
HMGCS1-207ENST00000514610 ANTXR1Q9H6X2 564 aa8.16□□□□□ -1.1
HMGCS1-207ENST00000514610 PICK1Q9NRD5 415 aa8.16□□□□□ -1.1
HMGCS1-207ENST00000514610 REV1Q9UBZ9 1251 aa8.16□□□□□ -1.1
HMGCS1-207ENST00000514610 GAS2O43903 313 aaKnown RBP8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 IGSF3O75054 1194 aa8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 PGRP06401 933 aa8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 PLCG1P19174 1290 aa8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 RAB6AP20340 208 aa8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 ETF1P62495 437 aaKnown RBP8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 MYRFLQ96LU7 910 aa8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 PIDD1Q9HB75 910 aa8.15□□□□□ -1.1
HMGCS1-207ENST00000514610 RNGTTO60942 597 aaKnown RBP8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 SF3A1Q15459 793 aaKnown RBP8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 NKG7Q16617 165 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 TMEM201Q5SNT2 666 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 UTP4Q969X6 686 aaKnown RBP8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 SHDQ96IW2 340 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 FERD3LQ96RJ6 166 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 SRRTQ9BXP5 876 aaKnown RBP8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 SEMA6CQ9H3T2 930 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 TJP2Q9UDY2 1190 aa8.14□□□□□ -1.11
HMGCS1-207ENST00000514610 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 DYNC1LI2O43237 492 aaPredicted RBP8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 BMP3P12645 472 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 USP11P51784 963 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 PDE4BQ07343 736 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 UVSSAQ2YD98 709 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 PLA2G4EQ3MJ16 856 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 SMYD4Q8IYR2 804 aaPredicted RBP8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 DHX38Q92620 1227 aaKnown RBP8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 DRC1Q96MC2 740 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 STRIP2Q9ULQ0 834 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 MRVI1Q9Y6F6 885 aa8.13□□□□□ -1.11
HMGCS1-207ENST00000514610 UPK3BL1B0FP48 263 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 UPK3BL2E5RIL1 263 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 NFICP08651 508 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 ATP2B1P20020 1258 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 GATA4P43694 442 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 SLBPQ14493 270 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 FBXW10Q5XX13 1052 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 FAM169BQ8N8A8 192 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 PPP1R1BQ9UD71 204 aaPredicted RBP8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 DAGLAQ9Y4D2 1042 aa8.12□□□□□ -1.11
HMGCS1-207ENST00000514610 SLC22A31A6NKX4 558 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 MEIS3P2A8K0S8 358 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 CHURC1-FNTBB4DL54 471 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 MAP4P27816 1152 aaKnown RBP8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 ETFBP38117 255 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 GIPRP48546 466 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 LSRQ86X29 649 aaPredicted RBP8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 HID1Q8IV36 788 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 RBBP8NLQ8NC74 664 aaPredicted RBP8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 CPLX3Q8WVH0 158 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 ZNF408Q9H9D4 720 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 KLHL3Q9UH77 587 aa8.11□□□□□ -1.11
HMGCS1-207ENST00000514610 IMPDH2P12268 514 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms