RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 CENPFP49454 3210 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 LOC285556D6RIA3 1793 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 IDH1O75874 414 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 CERS3Q8IU89 383 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 TGFBRAP1Q8WUH2 860 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 ARMC5Q96C12 935 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 PARK7Q99497 189 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 ARHGAP39Q9C0H5 1083 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 RBBP6Q7Z6E9 1792 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 ATAD5Q96QE3 1844 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 PTPRFP10586 1907 aa12.76□□□□□ -0.37
HMGXB3-205ENST00000514469 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 CYP7A1P22680 504 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 DYNLL1P63167 89 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 METTL16Q86W50 562 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 MAGEB6Q8N7X4 407 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 DNAJC18Q9H819 358 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 PI4KBQ9UBF8 816 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 SLC45A1Q9Y2W3 748 aa12.75□□□□□ -0.37
HMGXB3-205ENST00000514469 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 GNRH1P01148 92 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 CAP2P40123 477 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 KIF22Q14807 665 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 PTCH2Q9Y6C5 1203 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 BRCA2P51587 3418 aa12.74□□□□□ -0.37
HMGXB3-205ENST00000514469 APBB1O00213 710 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 IFIT2P09913 472 aaKnown RBP12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 CYP2C8P10632 490 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 BCRP11274 1271 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 CTGFP29279 349 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 MIGA1Q8NAN2 632 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
HMGXB3-205ENST00000514469 PRMT2P55345 433 aa12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 SAP30BPQ9UHR5 308 aaKnown RBP12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
HMGXB3-205ENST00000514469 USP17L5A8MUK1 530 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 HLA-DOAP06340 250 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 PDE6AP16499 860 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 PSMC4P43686 418 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 SLC9C1Q4G0N8 1177 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 TREML2Q5T2D2 321 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 FOXP4Q8IVH2 680 aaPredicted RBP12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 EHD4Q9H223 541 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
HMGXB3-205ENST00000514469 TCRBV5S4A2TA0A5A2 114 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 GOLIM4O00461 696 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 ASNSP08243 561 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 ATP5JP18859 108 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 OSBPP22059 807 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 USP5P45974 858 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 HMGCS2P54868 508 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 JAG1P78504 1218 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 SPP2Q13103 211 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 SHROOM1Q2M3G4 852 aaPredicted RBP12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 SLC9C2Q5TAH2 1124 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 WDR18Q9BV38 432 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 LRRCC1Q9C099 1032 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 SRRDQ9UH36 339 aa12.7□□□□□ -0.38
HMGXB3-205ENST00000514469 ZNF532Q9HCE3 1301 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 MAGEB6P1A0A0J9YX57 407 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 GDF11O95390 407 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 NBPF11Q86T75 865 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 SMCR8Q8TEV9 937 aaPredicted RBP12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 HAUS7Q99871 368 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 PAG1Q9NWQ8 432 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 ZBTB21Q9ULJ3 1066 aa12.69□□□□□ -0.38
HMGXB3-205ENST00000514469 MYH1P12882 1939 aa12.68□□□□□ -0.38
HMGXB3-205ENST00000514469 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms