RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SH3RF3Q8TEJ3 882 aaPredicted RBP17.43■□□□□ 0.38
VCAN-211ENST00000513984 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
VCAN-211ENST00000513984 ZNF646O15015 1829 aaPredicted RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 RANBP6O60518 1105 aaKnown RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 IFNAR1P17181 557 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 MFSD14BQ5SR56 506 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 EN1Q05925 392 aaPredicted RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 RTN1Q16799 776 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 IQCA1Q86XH1 822 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 ENAHQ8N8S7 591 aaPredicted RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
VCAN-211ENST00000513984 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
VCAN-211ENST00000513984 GAKO14976 1311 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 PRDM1O75626 825 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 CYP2D6P10635 497 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 USP5P45974 858 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 EVX2Q03828 476 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 PDE4BQ07343 736 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 SLF2Q8IX21 1173 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 PHKBQ93100 1093 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 ALG1Q9BT22 464 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
VCAN-211ENST00000513984 LETM1O95202 739 aaPredicted RBP17.4■□□□□ 0.38
VCAN-211ENST00000513984 FMNL1O95466 1100 aaPredicted RBP17.4■□□□□ 0.38
VCAN-211ENST00000513984 OTUD7BQ6GQQ9 843 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 STYK1Q6J9G0 422 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
VCAN-211ENST00000513984 BRAPQ7Z569 592 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 SUGT1Q9Y2Z0 365 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 PLCG2P16885 1265 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 BTDP43251 543 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
VCAN-211ENST00000513984 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 C2CD5Q86YS7 1000 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
VCAN-211ENST00000513984 ZC3H12CQ9C0D7 883 aaKnown RBP17.4■□□□□ 0.38
VCAN-211ENST00000513984 TMX4Q9H1E5 349 aaPredicted RBP17.4■□□□□ 0.38
VCAN-211ENST00000513984 MYH8P13535 1937 aa17.39■□□□□ 0.38
VCAN-211ENST00000513984 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
VCAN-211ENST00000513984 KIF23Q02241 960 aaPredicted RBP17.39■□□□□ 0.37
VCAN-211ENST00000513984 IFIT1BQ5T764 474 aaKnown RBP17.39■□□□□ 0.37
VCAN-211ENST00000513984 PGBD1Q96JS3 809 aa17.39■□□□□ 0.37
VCAN-211ENST00000513984 AIFM3Q96NN9 605 aa17.39■□□□□ 0.37
VCAN-211ENST00000513984 GOLGA6L4A6NEF3 574 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 H0YIN7 160 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 GTF2IP78347 998 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 NBPF11Q86T75 865 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 TGFBRAP1Q8WUH2 860 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 WASF1Q92558 559 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
VCAN-211ENST00000513984 SLC26A6Q9BXS9 759 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 GJB4Q9NTQ9 266 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 ADAMTSL1Q8N6G6 1762 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 SCN9AQ15858 1988 aa17.38■□□□□ 0.37
VCAN-211ENST00000513984 NASPP49321 788 aaPredicted RBP17.37■□□□□ 0.37
VCAN-211ENST00000513984 KRT40Q6A162 431 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 TRIM22Q8IYM9 498 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 EYA3Q99504 573 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 DDAH1O94760 285 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 CALM1P0DP23 149 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 CALM2P0DP24 149 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 CALM3P0DP25 149 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 LIG1P18858 919 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 RHBDL3P58872 404 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 TPRNQ4KMQ1 711 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 CRACR2BQ8N4Y2 399 aaPredicted RBP17.37■□□□□ 0.37
VCAN-211ENST00000513984 NUP133Q8WUM0 1156 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 FTOQ9C0B1 505 aaKnown RBP eCLIP17.37■□□□□ 0.37
VCAN-211ENST00000513984 RTEL1Q9NZ71 1219 aa17.37■□□□□ 0.37
VCAN-211ENST00000513984 TROAPQ12815 778 aa17.36■□□□□ 0.37
VCAN-211ENST00000513984 TEX11Q8IYF3 940 aa17.36■□□□□ 0.37
VCAN-211ENST00000513984 PSME4Q14997 1843 aa17.36■□□□□ 0.37
VCAN-211ENST00000513984 DEXIO95424 95 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 CEBPZQ03701 1054 aaKnown RBP17.35■□□□□ 0.37
VCAN-211ENST00000513984 TRIM29Q14134 588 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 RBM28Q9NW13 759 aaKnown RBP17.35■□□□□ 0.37
VCAN-211ENST00000513984 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 FLT1P17948 1338 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 YEATS4O95619 227 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms