RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 UBE2Q2LH0YL09 131 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 ASNSP08243 561 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 PCP11498 1178 aaKnown RBP8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 TTC22Q5TAA0 569 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 DIAPH3Q9NSV4 1193 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 SERPINB13Q9UIV8 391 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 MYH1P12882 1939 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 MYO5AQ9Y4I1 1855 aaKnown RBP8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 CACNB3P54284 484 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 ALX1Q15699 326 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 NOM1Q5C9Z4 860 aaKnown RBP8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 MIGA1Q8NAN2 632 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 BCL11AQ9H165 835 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
RAPGEF2-212ENST00000513816 CDK5RAP2Q96SN8 1893 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 PATL2C9JE40 543 aaKnown RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 CETPP11597 493 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 DYNLL1P63167 89 aaKnown RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 PABPC4Q13310 644 aaKnown RBP eCLIP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 MCMDC2Q4G0Z9 681 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 MAPKAPK5Q8IW41 473 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 STRBPQ96SI9 672 aaKnown RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 DDX4Q9NQI0 724 aaKnown RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 SLC4A4Q9Y6R1 1079 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 SNAPC2Q13487 334 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 FASTKD5Q7L8L6 764 aaKnown RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 CFHR5Q9BXR6 569 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 SH2D4AQ9H788 454 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 DCP1AQ9NPI6 582 aaPredicted RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 DOCK1Q14185 1865 aa8.54□□□□□ -1.04
RAPGEF2-212ENST00000513816 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 GPAA1O43292 621 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 TM4SF4P48230 202 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 MCM9Q9NXL9 1143 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 ARHGEF6Q15052 776 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 CYP4F22Q6NT55 531 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 ADGRA1Q86SQ6 560 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 LCORLQ8N3X6 602 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 OTUD7AQ8TE49 926 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 RILPL2Q969X0 211 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 ARMT1Q9H993 441 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 SLC45A1Q9Y2W3 748 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 ROBO3Q96MS0 1386 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 DDTLA6NHG4 134 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 FAM155AB1AL88 458 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 KCNH4Q9UQ05 1017 aa8.53□□□□□ -1.04
RAPGEF2-212ENST00000513816 VGLL4Q14135 290 aa8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 PRAMEF18Q5VWM3 479 aa8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 GTF3C2Q8WUA4 911 aaPredicted RBP8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 WDR18Q9BV38 432 aa8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 SYNPO2Q9UMS6 1093 aa8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.04
RAPGEF2-212ENST00000513816 OTOFQ9HC10 1997 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 C19orf81C9J6K1 198 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 SDSP20132 328 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 CAP2P40123 477 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 TDO2P48775 406 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 USP14P54578 494 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 KIF23Q02241 960 aaPredicted RBP8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 FMR1Q06787 632 aaKnown RBP eCLIP8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 BMP2KLQ5H9B9 411 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 SH3BP5LQ7L8J4 393 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 NAPBQ9H115 298 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 WBP1LQ9NX94 342 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 SNCAIPQ9Y6H5 919 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 CCDC171Q6TFL3 1326 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 PDE4BQ07343 736 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 C12orf60Q5U649 245 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 TATDN1Q6P1N9 297 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 OPTNQ96CV9 577 aa8.52□□□□□ -1.05
RAPGEF2-212ENST00000513816 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 PRKG1Q13976 671 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 OSBP2Q969R2 916 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 PUS7LQ9H0K6 701 aaKnown RBP8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 RNF41Q9H4P4 317 aaPredicted RBP8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 APPP05067 770 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 GABPAQ06546 454 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 CERKLQ49MI3 558 aaPredicted RBP8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 TMEM179Q6ZVK1 233 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 C16orf86Q6ZW13 317 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 PROCA1Q8NCQ7 364 aaPredicted RBP8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 DSCC1Q9BVC3 393 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 TSHZ3Q63HK5 1081 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 ANKRD23Q86SG2 305 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 ZFPM1Q8IX07 1006 aa8.51□□□□□ -1.05
RAPGEF2-212ENST00000513816 PDE4AP27815 886 aa8.5□□□□□ -1.05
RAPGEF2-212ENST00000513816 MIGA2Q7L4E1 593 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms