RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, human

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-211	ENST00000513803	FGFR2	P21802	821 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	CCND3	P30281	292 aa	Predicted RBP	13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	MAPK4	P31152	587 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	HMGCS2	P54868	508 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	CCDC27	Q2M243	656 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	SH3BP5L	Q7L8J4	393 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	CCDC84	Q86UT8	332 aa	Predicted RBP	13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	GPRC5A	Q8NFJ5	357 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	KAZALD1	Q96I82	304 aa		13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	TTYH1	Q9H313	450 aa	Predicted RBP	13.59	□□□□□ -0.23
NFKB1-211	ENST00000513803	CACNA1F	O60840	1977 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	RGS2	P41220	211 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	IRX3	P78415	501 aa	Predicted RBP	13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	RABL6	Q3YEC7	729 aa	Predicted RBP	13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	SLC4A10	Q6U841	1118 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	WWC1	Q8IX03	1113 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	LPIN2	Q92539	896 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	RAPGEFL1	Q9UHV5	662 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	IL16	Q14005	1332 aa		13.58	□□□□□ -0.24
NFKB1-211	ENST00000513803	TMEM265	A0A087WTH1	108 aa		13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	ATN1	P54259	1190 aa	Predicted RBP	13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	SH3D19	Q5HYK7	790 aa		13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	SLF2	Q8IX21	1173 aa		13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	BICC1	Q9H694	974 aa	Known RBP	13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	BDP1	A6H8Y1	2624 aa		13.57	□□□□□ -0.24
NFKB1-211	ENST00000513803	PTPRF	P10586	1907 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	USP17L5	A8MUK1	530 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	MSC	O60682	206 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	SLURP2	P0DP57	97 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	RTP1	P59025	263 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	C9orf50	Q5SZB4	431 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	MFSD14C	Q5VZR4	134 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	ZGPAT	Q8N5A5	531 aa	Known RBP	13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	USP6NL	Q92738	828 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	P2RX7	Q99572	595 aa	Known RBP	13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	AS3MT	Q9HBK9	375 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	SALL1	Q9NSC2	1324 aa		13.56	□□□□□ -0.24
NFKB1-211	ENST00000513803	SEMA3E	O15041	775 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	HOXA7	P31268	230 aa	Predicted RBP	13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	PICALM	Q13492	652 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	CCL14	Q16627	93 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	LPAR1	Q92633	364 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	FAM163A	Q96GL9	167 aa	Predicted RBP	13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	APBA2	Q99767	749 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	TMOD4	Q9NZQ9	345 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	DENND2A	Q9ULE3	1009 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	ATP11B	Q9Y2G3	1177 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	UTY	O14607	1347 aa		13.55	□□□□□ -0.24
NFKB1-211	ENST00000513803	DNM1L	O00429	736 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	GLRX3	O76003	335 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	HERVK_113	P62684	666 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	DDX10	Q13206	875 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	MORN1	Q5T089	497 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	GPR142	Q7Z601	462 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	PLEKHH3	Q7Z736	793 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	KLHDC4	Q8TBB5	520 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	BAD	Q92934	168 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	EDC3	Q96F86	508 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	CWC22	Q9HCG8	908 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	DDX4	Q9NQI0	724 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	RBPJL	Q9UBG7	517 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	DDX20	Q9UHI6	824 aa	Known RBP	13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	CDH23	Q9H251	3354 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	GAK	O14976	1311 aa		13.54	□□□□□ -0.24
NFKB1-211	ENST00000513803	EYA2	O00167	538 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	NPM3	O75607	178 aa	Known RBP	13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	CNGA1	P29973	690 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	CAP2	P40123	477 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	DZIP1	Q86YF9	867 aa	Known RBP	13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	ANKRD44	Q8N8A2	993 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	ARRDC4	Q8NCT1	418 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	WDR18	Q9BV38	432 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	TXNRD2	Q9NNW7	524 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	FANCI	Q9NVI1	1328 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	PHIP	Q8WWQ0	1821 aa		13.53	□□□□□ -0.24
NFKB1-211	ENST00000513803	FAM196B	A6NMK8	535 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	C19orf81	C9J6K1	198 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	HOXD11	P31277	338 aa	Predicted RBP	13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	BTD	P43251	543 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	BACE1	P56817	501 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	ERVK-9	P63128	1117 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	ERVK-24	P63145	666 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	EXOSC9	Q06265	439 aa	Known RBP	13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	MAP3K12	Q12852	859 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	MAP2K5	Q13163	448 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803		Q3C1V9	767 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	SLC39A5	Q6ZMH5	540 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	DOCK1	Q14185	1865 aa		13.52	□□□□□ -0.25
NFKB1-211	ENST00000513803	PIEZO1	Q92508	2521 aa		13.51	□□□□□ -0.25
NFKB1-211	ENST00000513803	PLXNB2	O15031	1838 aa		13.51	□□□□□ -0.25
NFKB1-211	ENST00000513803	DOCK2	Q92608	1830 aa		13.51	□□□□□ -0.25
NFKB1-211	ENST00000513803	RFX7	Q2KHR2	1363 aa		13.51	□□□□□ -0.25

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