RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 BTBD18B2RXH4 712 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 IRS4O14654 1257 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 FGAP02671 866 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 A1BGP04217 495 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 RBM5P52756 815 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 NAPAP54920 295 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 SECISBP2LQ93073 1101 aaKnown RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 SELENOOQ9BVL4 669 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 EPC1Q9H2F5 836 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 FAN1Q9Y2M0 1017 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 STX10O60499 249 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 LIG3P49916 1009 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 ANKRD18AQ8IVF6 992 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 UBLCP1Q8WVY7 318 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-209ENST00000513761 SAR1BQ9Y6B6 198 aa8.72□□□□□ -1.01
CLCN3-209ENST00000513761 PHLPP2Q6ZVD8 1323 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.01
CLCN3-209ENST00000513761 INCENPQ9NQS7 918 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.01
CLCN3-209ENST00000513761 MYO5CQ9NQX4 1742 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 TSPY3P0CV98 308 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 TSPY8P0CW00 308 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 IFI16Q16666 785 aaKnown RBP8.71□□□□□ -1.01
CLCN3-209ENST00000513761 TTC38Q5R3I4 469 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 SRGAP1Q7Z6B7 1085 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 SLC35F6Q8N357 371 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 GOLPH3LQ9H4A5 285 aa8.71□□□□□ -1.01
CLCN3-209ENST00000513761 ADCY10Q96PN6 1610 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ZMYND10O75800 440 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 PDE4DQ08499 809 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 POLA2Q14181 598 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 TTC19Q6DKK2 380 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-209ENST00000513761 B4GALNT4Q76KP1 1039 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 NOSTRINQ8IVI9 506 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 CDC5LQ99459 802 aaKnown RBP8.71□□□□□ -1.02
CLCN3-209ENST00000513761 TSGA10Q9BZW7 698 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 TAOK3Q9H2K8 898 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ZCCHC17Q9NP64 241 aaKnown RBP8.71□□□□□ -1.02
CLCN3-209ENST00000513761 GJB4Q9NTQ9 266 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ZNF532Q9HCE3 1301 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ENC1O14682 589 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 CALML3P27482 149 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 GIGYF2Q6Y7W6 1299 aaKnown RBP8.71□□□□□ -1.02
CLCN3-209ENST00000513761 GRAMD1CQ8IYS0 662 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 EEF2KMTQ96G04 330 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 DCAF5Q96JK2 942 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 FAM204AQ9H8W3 233 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ANKRD65E5RJM6 399 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 SASH1O94885 1247 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 KRT13P13646 458 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 GNAT2P19087 354 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ITGA6P23229 1130 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 WHAMMP3Q1A5X7 153 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 LRRC24Q50LG9 513 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ARFGAP2Q8N6H7 521 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 TEX13AQ9BXU3 409 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-209ENST00000513761 JAG2Q9Y219 1238 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.02
CLCN3-209ENST00000513761 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CDC23Q9UJX2 597 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CASP14P31944 242 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 SLC39A14Q15043 492 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 SLFNL1Q499Z3 407 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 SOWAHDA6NJG2 315 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CALM1P0DP23 149 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CALM2P0DP24 149 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CALM3P0DP25 149 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 GNGT1P63211 74 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CCDC152Q4G0S7 254 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 SARM1Q6SZW1 724 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 KAT6BQ8WYB5 2073 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 ACTN2P35609 894 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 ATP1A2P50993 1020 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 LETM2Q2VYF4 491 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 SMYD4Q8IYR2 804 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-209ENST00000513761 PAIP2Q9BPZ3 127 aaKnown RBP8.7□□□□□ -1.02
CLCN3-209ENST00000513761 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 MORC2Q9Y6X9 1032 aaPredicted RBP8.7□□□□□ -1.02
CLCN3-209ENST00000513761 CLTCL1P53675 1640 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 LRRIQ1Q96JM4 1722 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 TNNC1P63316 161 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 POTEDQ86YR6 584 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 ANKS4BQ8N8V4 417 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 AIFM3Q96NN9 605 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 POLR3EQ9NVU0 708 aa8.7□□□□□ -1.02
CLCN3-209ENST00000513761 IKBKBO14920 756 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 BCAS4Q8TDM0 211 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 PREX2Q70Z35 1606 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 IQGAP3Q86VI3 1631 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 NAA25Q14CX7 972 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 CCT5P48643 541 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 RBL2Q08999 1139 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 RAPGEF1Q13905 1077 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 KLHL7Q8IXQ5 586 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms