RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 ARMC5Q96C12 935 aa8.9□□□□□ -0.98
HTT-212ENST00000513639 GINM1Q9NU53 330 aa8.9□□□□□ -0.98
HTT-212ENST00000513639 ZBTB40Q9NUA8 1239 aa8.9□□□□□ -0.98
HTT-212ENST00000513639 AATFQ9NY61 560 aaKnown RBP eCLIP8.9□□□□□ -0.98
HTT-212ENST00000513639 DBNLQ9UJU6 430 aaKnown RBP8.9□□□□□ -0.98
HTT-212ENST00000513639 TNRC18O15417 2968 aaPredicted RBP8.89□□□□□ -0.99
HTT-212ENST00000513639 ATRNL1Q5VV63 1379 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 IDH1O75874 414 aaKnown RBP8.89□□□□□ -0.99
HTT-212ENST00000513639 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
HTT-212ENST00000513639 IFIT2P09913 472 aaKnown RBP8.89□□□□□ -0.99
HTT-212ENST00000513639 CYP7A1P22680 504 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 CAP2P40123 477 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 ZAP70P43403 619 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 PSMC4P43686 418 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 MOGSQ13724 837 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 PDE3AQ14432 1141 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 GPAT2Q6NUI2 795 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 AACSQ86V21 672 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 ZNF280CQ8ND82 737 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 TGFBRAP1Q8WUH2 860 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 AS3MTQ9HBK9 375 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 EXOC6BQ9Y2D4 811 aa8.89□□□□□ -0.99
HTT-212ENST00000513639 KIAA0100Q14667 2235 aaKnown RBP8.88□□□□□ -0.99
HTT-212ENST00000513639 TRIM75PA6NK02 468 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 HLA-DOAP06340 250 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 ASNSP08243 561 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 FCGRTP55899 365 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 SPP2Q13103 211 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 GADL1Q6ZQY3 521 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 METTL16Q86W50 562 aaKnown RBP8.88□□□□□ -0.99
HTT-212ENST00000513639 CRACR2BQ8N4Y2 399 aaPredicted RBP8.88□□□□□ -0.99
HTT-212ENST00000513639 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
HTT-212ENST00000513639 SMCR8Q8TEV9 937 aaPredicted RBP8.88□□□□□ -0.99
HTT-212ENST00000513639 CPA4Q9UI42 421 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 COG6Q9Y2V7 657 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 CENPFP49454 3210 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 AK9Q5TCS8 1911 aa8.88□□□□□ -0.99
HTT-212ENST00000513639 C19orf81C9J6K1 198 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 OSBPP22059 807 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 USP5P45974 858 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 GCLCP48506 637 aaPredicted RBP8.87□□□□□ -0.99
HTT-212ENST00000513639 SLC4A8Q2Y0W8 1093 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 TTC6Q86TZ1 520 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 MAPKAPK5Q8IW41 473 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 MAGEB6Q8N7X4 407 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 RAET1EQ8TD07 263 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
HTT-212ENST00000513639 ZNF333Q96JL9 665 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 WDR18Q9BV38 432 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 PIH1D3Q9NQM4 214 aaKnown RBP8.87□□□□□ -0.99
HTT-212ENST00000513639 SRRDQ9UH36 339 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 AGTPBP1Q9UPW5 1226 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 PTCH2Q9Y6C5 1203 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 ARAP2Q8WZ64 1704 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 HTTP42858 3142 aa8.87□□□□□ -0.99
HTT-212ENST00000513639 RFX7Q2KHR2 1363 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 MYH2Q9UKX2 1941 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 COL2A1P02458 1487 aaPredicted RBP8.86□□□□□ -0.99
HTT-212ENST00000513639 APBB1O00213 710 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 CYP2C8P10632 490 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 BCRP11274 1271 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 CAPN2P17655 700 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 SLC9C2Q5TAH2 1124 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 ARHGAP39Q9C0H5 1083 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 IL1RAPL2Q9NP60 686 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
HTT-212ENST00000513639 TMOD4Q9NZQ9 345 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 BIN2Q9UBW5 565 aaPredicted RBP8.86□□□□□ -0.99
HTT-212ENST00000513639 PALD1Q9ULE6 856 aa8.86□□□□□ -0.99
HTT-212ENST00000513639 FLT1P17948 1338 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 MAGEB6P1A0A0J9YX57 407 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 GRK4P32298 578 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 BACE1P56817 501 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 UBXN2AP68543 259 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 CAP1Q01518 475 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
HTT-212ENST00000513639 ADGRA1Q86SQ6 560 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 SIRT2Q8IXJ6 389 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 MIGA1Q8NAN2 632 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 COA7Q96BR5 231 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.85□□□□□ -0.99
HTT-212ENST00000513639 SERPINB13Q9UIV8 391 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 TAOK2Q9UL54 1235 aa8.85□□□□□ -0.99
HTT-212ENST00000513639 ADGRA2Q96PE1 1338 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 MYH13Q9UKX3 1938 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 POTEFA5A3E0 1075 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 POLR3DP05423 398 aaPredicted RBP8.84□□□□□ -0.99
HTT-212ENST00000513639 SLURP2P0DP57 97 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 ATP5JP18859 108 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 EN2P19622 333 aaPredicted RBP8.84□□□□□ -0.99
HTT-212ENST00000513639 HOXA7P31268 230 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms