RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
CLDND1-227ENST00000513452 GAKO14976 1311 aa13.13□□□□□ -0.31
CLDND1-227ENST00000513452 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
CLDND1-227ENST00000513452 FAM196BA6NMK8 535 aa13.12□□□□□ -0.31
CLDND1-227ENST00000513452 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-227ENST00000513452 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLDND1-227ENST00000513452 CDX2Q99626 313 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-227ENST00000513452 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 TTC28Q96AY4 2481 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 EYA2O00167 538 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 PEX10O60683 326 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-227ENST00000513452 CACNB2Q08289 660 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-227ENST00000513452 DZIP1Q86YF9 867 aaKnown RBP13.11□□□□□ -0.31
CLDND1-227ENST00000513452 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 SOCS4Q8WXH5 440 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■■■□□ 18.4
CLDND1-227ENST00000513452 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
CLDND1-227ENST00000513452 MORF4L1Q9UBU8 362 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-227ENST00000513452 MAST2Q6P0Q8 1798 aa13.11□□□□□ -0.31
CLDND1-227ENST00000513452 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
CLDND1-227ENST00000513452 BTDP43251 543 aa13.1□□□□□ -0.31
CLDND1-227ENST00000513452 PHKA1P46020 1223 aa13.1□□□□□ -0.31
CLDND1-227ENST00000513452 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
CLDND1-227ENST00000513452 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
CLDND1-227ENST00000513452 ATP2B3Q16720 1220 aa13.1□□□□□ -0.31
CLDND1-227ENST00000513452 LHX8Q68G74 356 aa13.1□□□□□ -0.31
CLDND1-227ENST00000513452 DENND2AQ9ULE3 1009 aa13.1□□□□□ -0.31
CLDND1-227ENST00000513452 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
CLDND1-227ENST00000513452 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-227ENST00000513452 CCL14Q16627 93 aa13.09□□□□□ -0.31
CLDND1-227ENST00000513452 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
CLDND1-227ENST00000513452 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
CLDND1-227ENST00000513452 MYLIPQ8WY64 445 aa13.09□□□□□ -0.31
CLDND1-227ENST00000513452 OSBPL5Q9H0X9 879 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-227ENST00000513452 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
CLDND1-227ENST00000513452 SEMA3EO15041 775 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 TBC1D12O60347 775 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 RFX5P48382 616 aaPredicted RBP13.08□□□□□ -0.32
CLDND1-227ENST00000513452 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 ZGPATQ8N5A5 531 aaKnown RBP13.08□□□□□ -0.32
CLDND1-227ENST00000513452 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 SENP6Q9GZR1 1112 aaPredicted RBP13.08□□□□□ -0.32
CLDND1-227ENST00000513452 SIL1Q9H173 461 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 ABCF2Q9UG63 623 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 PRKAG2Q9UGJ0 569 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
CLDND1-227ENST00000513452 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
CLDND1-227ENST00000513452 USP17L5A8MUK1 530 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 COL9A1P20849 921 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 MAPK4P31152 587 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 CAP2P40123 477 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 RGS2P41220 211 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
CLDND1-227ENST00000513452 MTMR2Q13614 643 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 SH3D19Q5HYK7 790 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
CLDND1-227ENST00000513452 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
CLDND1-227ENST00000513452 APBA2Q99767 749 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
CLDND1-227ENST00000513452 LTBP2Q14767 1821 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 FRMPD3Q5JV73 1810 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 FOSL2P15408 326 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 RHBDL3P58872 404 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 HERVK_113P62684 666 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
CLDND1-227ENST00000513452 SHHQ15465 462 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
CLDND1-227ENST00000513452 C9orf50Q5SZB4 431 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 USP6NLQ92738 828 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
CLDND1-227ENST00000513452 PAGR1Q9BTK6 254 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 PORCNQ9H237 461 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 TMOD4Q9NZQ9 345 aa13.06□□□□□ -0.32
CLDND1-227ENST00000513452 ADORA1P30542 326 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 RTP1P59025 263 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 ERVK-24P63145 666 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 MORN1Q5T089 497 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 CCDC102BQ68D86 513 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
CLDND1-227ENST00000513452 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
CLDND1-227ENST00000513452 CWC22Q9HCG8 908 aaKnown RBP13.05□□□□□ -0.32
CLDND1-227ENST00000513452 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
CLDND1-227ENST00000513452 CDH23Q9H251 3354 aa13.04□□□□□ -0.32
CLDND1-227ENST00000513452 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
CLDND1-227ENST00000513452 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-227ENST00000513452 BACE1P56817 501 aa13.04□□□□□ -0.32
CLDND1-227ENST00000513452 MECOMQ03112 1051 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms