RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 C8orf74Q6P047 294 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 WTAPQ15007 396 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-211ENST00000513346 LSG1Q9H089 658 aaKnown RBP12.63□□□□□ -0.39
TCOF1-211ENST00000513346 MACROD2A1Z1Q3 448 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 BUB1BO60566 1050 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-211ENST00000513346 TNNC1P63316 161 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 MMS22LQ6ZRQ5 1243 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 FLAD1Q8NFF5 587 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
TCOF1-211ENST00000513346 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
TCOF1-211ENST00000513346 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-211ENST00000513346 KIF4AO95239 1232 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 APBA3O96018 575 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
TCOF1-211ENST00000513346 CCDC6Q16204 474 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 ESR2Q92731 530 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 CCDC51Q96ER9 411 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 KRT9P35527 623 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 PLA2G4DQ86XP0 818 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 KRT23Q9C075 422 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 A2ML1A8K2U0 1454 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 GSTTP1A0A1W2PQM5 241 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 SLFN14P0C7P3 912 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 ARID5BQ14865 1188 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 IFT20Q8IY31 132 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 METTL22Q9BUU2 404 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-211ENST00000513346 STMN4Q9H169 189 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-211ENST00000513346 VPS16Q9H269 839 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 SAR1BQ9Y6B6 198 aa12.62□□□□□ -0.39
TCOF1-211ENST00000513346 GOLGA8KD6RF30 607 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 GNPATO15228 680 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 TIMM10P62072 90 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-211ENST00000513346 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 SELENOSQ9BQE4 189 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 SLC52A2Q9HAB3 445 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 A1BGP04217 495 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 STAT6P42226 847 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 KIAA0753Q2KHM9 967 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 OGFOD1Q8N543 542 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
TCOF1-211ENST00000513346 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-211ENST00000513346 PPFIA4O75335 1185 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 RTN1Q16799 776 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 FBF1Q8TES7 1133 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 KIF1BO60333 1816 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 SSH3Q8TE77 659 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 PCDHA7Q9UN72 937 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 NCOA3Q9Y6Q9 1424 aa12.61□□□□□ -0.39
TCOF1-211ENST00000513346 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 USP44Q9H0E7 712 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 EIF3CLB5ME19 914 aaKnown RBP12.6□□□□□ -0.39
TCOF1-211ENST00000513346 RNF113AO15541 343 aaKnown RBP12.6□□□□□ -0.39
TCOF1-211ENST00000513346 PFKFB1P16118 471 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-211ENST00000513346 IQUBQ8NA54 791 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 PLBD2Q8NHP8 589 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 EIF3CQ99613 913 aaKnown RBP12.6□□□□□ -0.39
TCOF1-211ENST00000513346 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 IQGAP3Q86VI3 1631 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 RNF40O75150 1001 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 GCKP35557 465 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 PAF1Q8N7H5 531 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 FANCLQ9NW38 375 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 ABCC3O15438 1527 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 A0A1W2PQ27 194 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 A0A1W2PQ64 194 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 POLR2DO15514 142 aaKnown RBP12.6□□□□□ -0.39
TCOF1-211ENST00000513346 ADCK5Q3MIX3 580 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 RILPL1Q5EBL4 403 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 RUFY4Q6ZNE9 571 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
TCOF1-211ENST00000513346 E7EVH7 732 aa12.59□□□□□ -0.39
TCOF1-211ENST00000513346 GYS2P54840 703 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms