RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TTLL10Q6ZVT0 673 aa6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 ZSWIM9Q86XI8 627 aa6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 PLD6Q8N2A8 252 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 ARHGAP5Q13017 1502 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 DYNC1LI2O43237 492 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 MAOBP27338 520 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 POU4F3Q15319 338 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 AMIGO3Q86WK7 504 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 ASAP3Q8TDY4 903 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 EDEM1Q92611 657 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 CLP1Q92989 425 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 A2ML1A8K2U0 1454 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 KIDINS220Q9ULH0 1771 aa6.06□□□□□ -1.44
PDLIM5-218ENST00000513341 ZNF503-AS2A6NEH8 195 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 EREGO14944 169 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 CTSBP07858 339 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 AKAP4Q5JQC9 854 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 PEAR1Q5VY43 1037 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 ATCAYQ86WG3 371 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 LRRC56Q8IYG6 542 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 TTC16Q8NEE8 873 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 SNX29Q8TEQ0 813 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 CLEC4MQ9H2X3 399 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 DNMT1P26358 1616 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 MYO3AQ8NEV4 1616 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 CLIP1P30622 1438 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 TROQ12816 1431 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 FMN1Q68DA7 1419 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 CDC42BPBQ9Y5S2 1711 aa6.05□□□□□ -1.44
PDLIM5-218ENST00000513341 CDK13Q14004 1512 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 MED14O60244 1454 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 TMEM265A0A087WTH1 108 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 RANGAP1P46060 587 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 PCDH1Q08174 1060 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 ANGEL2Q5VTE6 544 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 HRASLS5Q96KN8 279 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 RAD18Q9NS91 495 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 DAGLAQ9Y4D2 1042 aa6.04□□□□□ -1.44
PDLIM5-218ENST00000513341 KIF14Q15058 1648 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 ALKQ9UM73 1620 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 SPAG9O60271 1321 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 POLR1AO95602 1720 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 PHACTR2O75167 634 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 TNFRSF21O75509 655 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 DNM1Q05193 864 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 ZNF423Q2M1K9 1284 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 CDCA8Q53HL2 280 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 GGT6Q6P531 493 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 DDX54Q8TDD1 881 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 STK32AQ8WU08 396 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 CRIM1Q9NZV1 1036 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 AP4E1Q9UPM8 1137 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 SNX11Q9Y5W9 270 aa6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 CLTCQ00610 1675 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-218ENST00000513341 VWDEQ8N2E2 1590 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 FAM135BQ49AJ0 1406 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 AOC2O75106 756 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 FAM87AP0C7U9 286 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 ZSCAN22P10073 491 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 EHHADHQ08426 723 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 KCNMB1Q16558 191 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 MLANAQ16655 118 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 AOC3Q16853 763 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 C8orf34Q49A92 452 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 NOM1Q5C9Z4 860 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 TRIM56Q9BRZ2 755 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 TNKS2Q9H2K2 1166 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 ABCC1P33527 1531 aa6.02□□□□□ -1.45
PDLIM5-218ENST00000513341 NEURL4Q96JN8 1562 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 ITSN2Q9NZM3 1697 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 EEA1Q15075 1411 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 LRRC7Q96NW7 1537 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 DEPDC5O75140 1603 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 A0A096LPE4 126 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 CEACAM5P06731 702 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 OXCT1P55809 520 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 CCNJLQ8IV13 435 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 CORO1BQ9BR76 489 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 WDR18Q9BV38 432 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 LMCD1Q9NZU5 365 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 AMOTL2Q9Y2J4 779 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 A2MP01023 1474 aa6.01□□□□□ -1.45
PDLIM5-218ENST00000513341 NPHP4O75161 1426 aaPredicted RBP6□□□□□ -1.45
PDLIM5-218ENST00000513341 KIAA1107Q9UPP5 1409 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 A6NHS1 94 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 ATG7O95352 703 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 B3GALT4O96024 378 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 BUD31P41223 144 aaPredicted RBP6□□□□□ -1.45
PDLIM5-218ENST00000513341 SRPK2P78362 688 aaKnown RBP6□□□□□ -1.45
PDLIM5-218ENST00000513341 ALKBH2Q6NS38 261 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 TNRQ92752 1358 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 SAMD9LQ8IVG5 1584 aa6□□□□□ -1.45
PDLIM5-218ENST00000513341 MIA2Q96PC5 1412 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms