RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 LDHBP07195 334 aaKnown RBP14.05□□□□□ -0.16
RNF4-218ENST00000513284 POTEEQ6S8J3 1075 aa14.05□□□□□ -0.16
RNF4-218ENST00000513284 TTC28Q96AY4 2481 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 TBC1D12O60347 775 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 XRCC5P13010 732 aaKnown RBP14.04□□□□□ -0.16
RNF4-218ENST00000513284 CCL14Q16627 93 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 Q3C1V9 767 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 ATG9AQ7Z3C6 839 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 ZSCAN29Q8IWY8 852 aaPredicted RBP14.04□□□□□ -0.16
RNF4-218ENST00000513284 MAFAQ8NHW3 353 aaPredicted RBP14.04□□□□□ -0.16
RNF4-218ENST00000513284 LPIN2Q92539 896 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 P2RX7Q99572 595 aaKnown RBP14.04□□□□□ -0.16
RNF4-218ENST00000513284 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
RNF4-218ENST00000513284 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 PNMA3Q9UL41 463 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 GAKO14976 1311 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 SALL1Q9NSC2 1324 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 DOCK2Q92608 1830 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 DOCK1Q14185 1865 aa14.04□□□□□ -0.16
RNF4-218ENST00000513284 COL9A1P20849 921 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 HMGCS2P54868 508 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 SHHQ15465 462 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 SH3D19Q5HYK7 790 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 ZNF697Q5TEC3 545 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 ZNF280CQ8ND82 737 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 MYLIPQ8WY64 445 aa14.03□□□□□ -0.16
RNF4-218ENST00000513284 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
RNF4-218ENST00000513284 EYA2O00167 538 aa14.02□□□□□ -0.17
RNF4-218ENST00000513284 SLC5A1P13866 664 aa14.02□□□□□ -0.17
RNF4-218ENST00000513284 ZEB1P37275 1124 aaPredicted RBP14.02□□□□□ -0.17
RNF4-218ENST00000513284 RHBDL3P58872 404 aa14.02□□□□□ -0.17
RNF4-218ENST00000513284 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
RNF4-218ENST00000513284 C9orf50Q5SZB4 431 aa14.02□□□□□ -0.17
RNF4-218ENST00000513284 ZNF384Q8TF68 577 aa14.02□□□□□ -0.17
RNF4-218ENST00000513284 RBPJLQ9UBG7 517 aa14.02□□□□□ -0.17
RNF4-218ENST00000513284 PHKA1P46020 1223 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 JAG1P78504 1218 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 PICALMQ13492 652 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 MORN1Q5T089 497 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 NUDT12Q9BQG2 462 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 SENP6Q9GZR1 1112 aaPredicted RBP14.01□□□□□ -0.17
RNF4-218ENST00000513284 USP44Q9H0E7 712 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 LOC285556D6RIA3 1793 aa14.01□□□□□ -0.17
RNF4-218ENST00000513284 MYH2Q9UKX2 1941 aa14□□□□□ -0.17
RNF4-218ENST00000513284 HOXA7P31268 230 aaPredicted RBP14□□□□□ -0.17
RNF4-218ENST00000513284 CAP2P40123 477 aa14□□□□□ -0.17
RNF4-218ENST00000513284 WDR63Q8IWG1 891 aa14□□□□□ -0.17
RNF4-218ENST00000513284 LBHD1Q9BQE6 289 aaPredicted RBP14□□□□□ -0.17
RNF4-218ENST00000513284 OSBPL5Q9H0X9 879 aaPredicted RBP14□□□□□ -0.17
RNF4-218ENST00000513284 PORCNQ9H237 461 aa14□□□□□ -0.17
RNF4-218ENST00000513284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14□□□□□ -0.17
RNF4-218ENST00000513284 MYH13Q9UKX3 1938 aa14□□□□□ -0.17
RNF4-218ENST00000513284 ZBTB22O15209 634 aa13.99□□□□□ -0.17
RNF4-218ENST00000513284 BTDP43251 543 aa13.99□□□□□ -0.17
RNF4-218ENST00000513284 ATN1P54259 1190 aaPredicted RBP13.99□□□□□ -0.17
RNF4-218ENST00000513284 PABPC4Q13310 644 aaKnown RBP eCLIP13.99□□□□□ -0.17
RNF4-218ENST00000513284 GPRC5AQ8NFJ5 357 aa13.99□□□□□ -0.17
RNF4-218ENST00000513284 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
RNF4-218ENST00000513284 DENND2AQ9ULE3 1009 aa13.99□□□□□ -0.17
RNF4-218ENST00000513284 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
RNF4-218ENST00000513284 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
RNF4-218ENST00000513284 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
RNF4-218ENST00000513284 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
RNF4-218ENST00000513284 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
RNF4-218ENST00000513284 ADORA1P30542 326 aa13.98□□□□□ -0.17
RNF4-218ENST00000513284 HERVK_113P62684 666 aa13.98□□□□□ -0.17
RNF4-218ENST00000513284 USP38Q8NB14 1042 aa13.98□□□□□ -0.17
RNF4-218ENST00000513284 SEMA3EO15041 775 aa13.97□□□□□ -0.17
RNF4-218ENST00000513284 ATP2B3Q16720 1220 aa13.97□□□□□ -0.17
RNF4-218ENST00000513284 SHROOM1Q2M3G4 852 aaPredicted RBP13.97□□□□□ -0.17
RNF4-218ENST00000513284 GPR142Q7Z601 462 aa13.97□□□□□ -0.17
RNF4-218ENST00000513284 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
RNF4-218ENST00000513284 SOCS4Q8WXH5 440 aa13.97□□□□□ -0.17
RNF4-218ENST00000513284 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
RNF4-218ENST00000513284 WDR18Q9BV38 432 aa13.97□□□□□ -0.17
RNF4-218ENST00000513284 GNL3LQ9NVN8 582 aaKnown RBP13.97□□□□□ -0.17
RNF4-218ENST00000513284 IGHA2P01877 340 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 BACE1P56817 501 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 RTP1P59025 263 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 SMAD3P84022 425 aaKnown RBP13.96□□□□□ -0.17
RNF4-218ENST00000513284 MTMR2Q13614 643 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 CCDC102BQ68D86 513 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 TRPV1Q8NER1 839 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 LTBP2Q14767 1821 aa13.96□□□□□ -0.17
RNF4-218ENST00000513284 MAST2Q6P0Q8 1798 aa13.96□□□□□ -0.18
RNF4-218ENST00000513284 MROH7-TTC4A0A0A0MT08 1334 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 TNFRSF10AO00220 468 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 MAPK4P31152 587 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 RGS2P41220 211 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 ERVK-9P63128 1117 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 ERVK-24P63145 666 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 MECOMQ03112 1051 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 RASGRF1Q13972 1273 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 PLEKHH3Q7Z736 793 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 BADQ92934 168 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 SIL1Q9H173 461 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
RNF4-218ENST00000513284 CNMDO75829 334 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms