RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FAM107BQ9H098 131 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 LIMCH1Q9UPQ0 1083 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 CLCA2Q9UQC9 943 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 FERMT3Q86UX7 667 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 ZNF513Q8N8E2 541 aaPredicted RBP9.93□□□□□ -0.82
VCAN-208ENST00000512590 NLRP7Q8WX94 980 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 TEKT1Q969V4 418 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 ALKBH8Q96BT7 664 aaKnown RBP9.93□□□□□ -0.82
VCAN-208ENST00000512590 KCNK9Q9NPC2 374 aa9.93□□□□□ -0.82
VCAN-208ENST00000512590 BRD1O95696 1058 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 SDE2Q6IQ49 451 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 SYNJ2BP-COX16A0A087WUM0 186 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
VCAN-208ENST00000512590 MAP3K13O43283 966 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 GNAT2P19087 354 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 PRPSAP1Q14558 356 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 MCMDC2Q4G0Z9 681 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 CEP128Q6ZU80 1094 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 ADAT2Q7Z6V5 191 aaKnown RBP9.92□□□□□ -0.82
VCAN-208ENST00000512590 PATL1Q86TB9 770 aaKnown RBP9.92□□□□□ -0.82
VCAN-208ENST00000512590 COX16Q9P0S2 106 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 DENND2AQ9ULE3 1009 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 PSMA7O14818 248 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 BLVRAP53004 296 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 ADALQ6DHV7 355 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 TADA2BQ86TJ2 420 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 PGBD1Q96JS3 809 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.92□□□□□ -0.82
VCAN-208ENST00000512590 HESX1Q9UBX0 185 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 SMIM23A6NLE4 172 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 ZBTB43O43298 467 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 CYLC1P35663 651 aaPredicted RBP9.92□□□□□ -0.82
VCAN-208ENST00000512590 LZICQ8WZA0 190 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 MRRFQ96E11 262 aaKnown RBP9.92□□□□□ -0.82
VCAN-208ENST00000512590 MAN1C1Q9NR34 630 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 SPOPO43791 374 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 URI1O94763 535 aaPredicted RBP9.92□□□□□ -0.82
VCAN-208ENST00000512590 NCAPH2Q6IBW4 605 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 ARMCX5Q6P1M9 558 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 SCYL2Q6P3W7 929 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 ATP6V0A1Q93050 837 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 ATP6V1E2Q96A05 226 aa9.92□□□□□ -0.82
VCAN-208ENST00000512590 IRS4O14654 1257 aaPredicted RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 ESRRBO95718 433 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 IL1RL1Q01638 556 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 CNKSR1Q969H4 720 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 SUGCTQ9HAC7 445 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 NVLO15381 856 aaKnown RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 PPFIA2O75334 1257 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 CFBP00751 764 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 MIGA1Q8NAN2 632 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 MTRF1LQ9UGC7 380 aaKnown RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 SUGT1Q9Y2Z0 365 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 EIF3CLB5ME19 914 aaKnown RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 CALUO43852 315 aaPredicted RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 TNFAIP3P21580 790 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 TFDP1Q14186 410 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 JADE1Q6IE81 842 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 SUPT3HB4E1H0 165 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 MCM5P33992 734 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 DALRD3Q5D0E6 543 aaKnown RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 SZRD1Q7Z422 152 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 ALAS1P13196 640 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 MFSD14CQ5VZR4 134 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 NME8Q8N427 588 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 FSIP1Q8NA03 581 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 HDAC11Q96DB2 347 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 SUDS3Q9H7L9 328 aaPredicted RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 RIC8AQ9NPQ8 531 aa9.91□□□□□ -0.82
VCAN-208ENST00000512590 TRPC5Q9UL62 973 aaPredicted RBP9.91□□□□□ -0.82
VCAN-208ENST00000512590 TNNI1P19237 187 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 RFC1P35251 1148 aaPredicted RBP9.9□□□□□ -0.82
VCAN-208ENST00000512590 CASP2P42575 452 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 NBPF11Q86T75 865 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 WHAMMQ8TF30 809 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 RGL1Q9NZL6 768 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 TMEM247A6NEH6 219 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 PI4K2BG5E9Z4 385 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 HIBADHP31937 336 aaKnown RBP9.9□□□□□ -0.82
VCAN-208ENST00000512590 SLC1A4P43007 532 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 PRR16Q569H4 304 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 SH2D4BQ5SQS7 431 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 EXOC8Q8IYI6 725 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 PI4K2BQ8TCG2 481 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 URGCPQ8TCY9 931 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 ZKSCAN3Q9BRR0 538 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 NRBP2Q9NSY0 501 aa9.9□□□□□ -0.82
VCAN-208ENST00000512590 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.82
VCAN-208ENST00000512590 AKNAQ7Z591 1439 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms