RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 KIF2AO00139 706 aaPredicted RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 ZBTB22O15209 634 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 FGRP09769 529 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 CYP7A1P22680 504 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 PTPREP23469 700 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 SEC23AQ15436 765 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 ANKRD7Q92527 254 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 ESR2Q92731 530 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 RNF26Q9BY78 433 aaPredicted RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 XPO4Q9C0E2 1151 aaKnown RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 HOOK1Q9UJC3 728 aaKnown RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 SPATA31A5Q5VU36 1347 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 SPATA31A7Q8IWB4 1347 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 BTBD18B2RXH4 712 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 SEMA3EO15041 775 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 TUBB4AP04350 444 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 TOB1P50616 345 aaPredicted RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 MDM2Q00987 491 aaPredicted RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 ARID5BQ14865 1188 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 ANKRD18AQ8IVF6 992 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 ZNF654Q8IZM8 581 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 CCAR2Q8N163 923 aaKnown RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
CPNE4-210ENST00000512332 UBAC1Q9BSL1 405 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 HSD3B7Q9H2F3 369 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
CPNE4-210ENST00000512332 PDS5AQ29RF7 1337 aaKnown RBP10.63□□□□□ -0.71
CPNE4-210ENST00000512332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.63□□□□□ -0.71
CPNE4-210ENST00000512332 MAGEB6P1A0A0J9YX57 407 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 FAM177BA6PVY3 158 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 BIN1O00499 593 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 GUCY1A2P33402 732 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 MYL5Q02045 173 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 PTPN14Q15678 1187 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 NT5DC1Q5TFE4 455 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 CEP135Q66GS9 1140 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
CPNE4-210ENST00000512332 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
CPNE4-210ENST00000512332 CEP131Q9UPN4 1083 aa10.63□□□□□ -0.71
CPNE4-210ENST00000512332 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
CPNE4-210ENST00000512332 CBFA2T2O43439 604 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 FANCCQ00597 558 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 LONRF3Q496Y0 759 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 CAVIN4Q5BKX8 364 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
CPNE4-210ENST00000512332 ADGRA1Q86SQ6 560 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 MIGA1Q8NAN2 632 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 CNNM3Q8NE01 707 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 CCDC112Q8NEF3 446 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 ACSBG1Q96GR2 724 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 CLIC6Q96NY7 704 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 TOMM22Q9NS69 142 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
CPNE4-210ENST00000512332 NRDCO43847 1150 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 IGSF3O75054 1194 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 SMC2O95347 1197 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 XBP1P17861 261 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 KANK3Q6NY19 840 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
CPNE4-210ENST00000512332 TSC1Q92574 1164 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
CPNE4-210ENST00000512332 SRPRBQ9Y5M8 271 aaKnown RBP10.62□□□□□ -0.71
CPNE4-210ENST00000512332 COL5A3P25940 1745 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 UBE2Q2LH0YL09 131 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 CALM1P0DP23 149 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 CALM2P0DP24 149 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 CALM3P0DP25 149 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 SFPQP23246 707 aaKnown RBP eCLIP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 PNOCQ13519 176 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 CT47A1Q5JQC4 288 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 TRIML1Q8N9V2 468 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 ZKSCAN3Q9BRR0 538 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 RAI14Q9P0K7 980 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 PCDHA5Q9Y5H7 936 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 TNKSO95271 1327 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 PRPF3O43395 683 aaKnown RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 NT5C2P49902 561 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 FUT2Q10981 343 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 FAM84BQ96KN1 310 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 RBM28Q9NW13 759 aaKnown RBP10.61□□□□□ -0.71
CPNE4-210ENST00000512332 ABCF2Q9UG63 623 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 MINPP1Q9UNW1 487 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 KCNJ14Q9UNX9 436 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 CACNA1SQ13698 1873 aa10.61□□□□□ -0.71
CPNE4-210ENST00000512332 USP27XA6NNY8 438 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 BMP15O95972 392 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 LMOD1P29536 600 aaPredicted RBP10.6□□□□□ -0.71
CPNE4-210ENST00000512332 GYG1P46976 350 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 ERFEQ4G0M1 354 aa10.6□□□□□ -0.71
CPNE4-210ENST00000512332 ENAHQ8N8S7 591 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms