RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
PDLIM5-217ENST00000512274 HMGCRP04035 888 aa12.8□□□□□ -0.36
PDLIM5-217ENST00000512274 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-217ENST00000512274 KAZALD1Q96I82 304 aa12.8□□□□□ -0.36
PDLIM5-217ENST00000512274 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-217ENST00000512274 CXCL11O14625 94 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 FOSL2P15408 326 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 ANKRD45Q5TZF3 282 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 ZNF112Q9UJU3 913 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 OGDHLQ9ULD0 1010 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
PDLIM5-217ENST00000512274 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 FRAT2O75474 233 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 FASTKD5Q7L8L6 764 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 SUCLG2Q96I99 432 aa12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 PTPRFP10586 1907 aa12.78□□□□□ -0.36
PDLIM5-217ENST00000512274 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 RGS3P49796 1198 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 HDLBPQ00341 1268 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 EPHA10Q5JZY3 1008 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 NOL9Q5SY16 702 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 ZDHHC15Q96MV8 337 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 TTYH1Q9H313 450 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-217ENST00000512274 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 FOXO4P98177 505 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 SHHQ15465 462 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 VPS37DQ86XT2 251 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 FAM151AQ8WW52 585 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 TRIB2Q92519 343 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 VCANP13611 3396 aa12.76□□□□□ -0.37
PDLIM5-217ENST00000512274 COL6A1P12109 1028 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 PTPRAP18433 802 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 CYP2B6P20813 491 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 BICC1Q9H694 974 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
PDLIM5-217ENST00000512274 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 SCYL3Q8IZE3 742 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 SENP6Q9GZR1 1112 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 SLC45A1Q9Y2W3 748 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 AFG3L2Q9Y4W6 797 aa12.74□□□□□ -0.37
PDLIM5-217ENST00000512274 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 NFIAQ12857 509 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 FAM110CQ1W6H9 321 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 TREML2Q5T2D2 321 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 RHPN1Q8TCX5 695 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 TBC1D22AQ8WUA7 517 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 LTBP2Q14767 1821 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 MAST2Q6P0Q8 1798 aa12.73□□□□□ -0.37
PDLIM5-217ENST00000512274 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 SURF6O75683 361 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 CDC42EP5Q6NZY7 148 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 HHIPL2Q6UWX4 724 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 FBXO33Q7Z6M2 555 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 EXOC6BQ9Y2D4 811 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms