RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
RNF4-216ENST00000511859 SPP2Q13103 211 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 LRRC26Q2I0M4 334 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 ANKRD44Q8N8A2 993 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 ZNF280CQ8ND82 737 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 NUDT12Q9BQG2 462 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 OSBPL5Q9H0X9 879 aaPredicted RBP14.47□□□□□ -0.09
RNF4-216ENST00000511859 MORF4L1Q9UBU8 362 aa14.47□□□□□ -0.09
RNF4-216ENST00000511859 PLXNB2O15031 1838 aa14.46□□□□□ -0.09
RNF4-216ENST00000511859 SEMA3EO15041 775 aa14.46□□□□□ -0.1
RNF4-216ENST00000511859 CYP2B6P20813 491 aa14.46□□□□□ -0.1
RNF4-216ENST00000511859 ZGPATQ8N5A5 531 aaKnown RBP14.46□□□□□ -0.1
RNF4-216ENST00000511859 KLHDC4Q8TBB5 520 aa14.46□□□□□ -0.1
RNF4-216ENST00000511859 SOCS4Q8WXH5 440 aa14.46□□□□□ -0.1
RNF4-216ENST00000511859 FAM163AQ96GL9 167 aaPredicted RBP14.46□□□□□ -0.1
RNF4-216ENST00000511859 CDX2Q99626 313 aaPredicted RBP14.46□□□□□ -0.1
RNF4-216ENST00000511859 ASCC2Q9H1I8 757 aaPredicted RBP14.46□□□□□ -0.1
RNF4-216ENST00000511859 DENND2AQ9ULE3 1009 aa14.46□□□□□ -0.1
RNF4-216ENST00000511859 EYA2O00167 538 aa14.45□□□□□ -0.1
RNF4-216ENST00000511859 ZBTB22O15209 634 aa14.45□□□□□ -0.1
RNF4-216ENST00000511859 LHX8Q68G74 356 aa14.45□□□□□ -0.1
RNF4-216ENST00000511859 NCOR1O75376 2440 aa14.45□□□□□ -0.1
RNF4-216ENST00000511859 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
RNF4-216ENST00000511859 HMGCS2P54868 508 aa14.44□□□□□ -0.1
RNF4-216ENST00000511859 CACNB2Q08289 660 aaPredicted RBP14.44□□□□□ -0.1
RNF4-216ENST00000511859 SH3D19Q5HYK7 790 aa14.44□□□□□ -0.1
RNF4-216ENST00000511859 CCDC84Q86UT8 332 aaPredicted RBP14.44□□□□□ -0.1
RNF4-216ENST00000511859 MAFAQ8NHW3 353 aaPredicted RBP14.44□□□□□ -0.1
RNF4-216ENST00000511859 SEMA6BQ9H3T3 888 aa14.44□□□□□ -0.1
RNF4-216ENST00000511859 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.44□□□□□ -0.1
RNF4-216ENST00000511859 GAKO14976 1311 aa14.44□□□□□ -0.1
RNF4-216ENST00000511859 LOC285556D6RIA3 1793 aa14.43□□□□□ -0.1
RNF4-216ENST00000511859 SLURP2P0DP57 97 aa14.43□□□□□ -0.1
RNF4-216ENST00000511859 GPRC5AQ8NFJ5 357 aa14.43□□□□□ -0.1
RNF4-216ENST00000511859 AS3MTQ9HBK9 375 aa14.43□□□□□ -0.1
RNF4-216ENST00000511859 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
RNF4-216ENST00000511859 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.43□□□□□ -0.1
RNF4-216ENST00000511859 PRKAG2Q9UGJ0 569 aa14.43□□□□□ -0.1
RNF4-216ENST00000511859 RFX7Q2KHR2 1363 aa14.42□□□□□ -0.1
RNF4-216ENST00000511859 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
RNF4-216ENST00000511859 ZKSCAN1P17029 563 aaPredicted RBP14.42□□□□□ -0.1
RNF4-216ENST00000511859 MAPK4P31152 587 aa14.42□□□□□ -0.1
RNF4-216ENST00000511859 HOXA7P31268 230 aaPredicted RBP14.42□□□□□ -0.1
RNF4-216ENST00000511859 IRX3P78415 501 aaPredicted RBP14.42□□□□□ -0.1
RNF4-216ENST00000511859 PICALMQ13492 652 aa14.42□□□□□ -0.1
RNF4-216ENST00000511859 PDE3AQ14432 1141 aa14.42□□□□□ -0.1
RNF4-216ENST00000511859 SENP6Q9GZR1 1112 aaPredicted RBP14.42□□□□□ -0.1
RNF4-216ENST00000511859 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
RNF4-216ENST00000511859 MAP4K4O95819 1239 aaPredicted RBP14.41□□□□□ -0.1
RNF4-216ENST00000511859 CCND3P30281 292 aaPredicted RBP14.41□□□□□ -0.1
RNF4-216ENST00000511859 CAP2P40123 477 aa14.41□□□□□ -0.1
RNF4-216ENST00000511859 RGS2P41220 211 aa14.41□□□□□ -0.1
RNF4-216ENST00000511859 ATP2B3Q16720 1220 aa14.41□□□□□ -0.1
RNF4-216ENST00000511859 SPTY2D1Q68D10 685 aaPredicted RBP14.41□□□□□ -0.1
RNF4-216ENST00000511859 DZIP1Q86YF9 867 aaKnown RBP14.41□□□□□ -0.1
RNF4-216ENST00000511859 USP6NLQ92738 828 aa14.41□□□□□ -0.1
RNF4-216ENST00000511859 CEP126Q9P2H0 1117 aa14.41□□□□□ -0.1
RNF4-216ENST00000511859 ATAD5Q96QE3 1844 aa14.4□□□□□ -0.1
RNF4-216ENST00000511859 BTDP43251 543 aa14.4□□□□□ -0.1
RNF4-216ENST00000511859 RFX5P48382 616 aaPredicted RBP14.4□□□□□ -0.1
RNF4-216ENST00000511859 ATG9AQ7Z3C6 839 aa14.4□□□□□ -0.1
RNF4-216ENST00000511859 CCAR1Q8IX12 1150 aaKnown RBP14.4□□□□□ -0.1
RNF4-216ENST00000511859 P2RX7Q99572 595 aaKnown RBP14.4□□□□□ -0.1
RNF4-216ENST00000511859 MYO9BQ13459 2157 aa14.4□□□□□ -0.1
RNF4-216ENST00000511859 GPR75-ASB3A0A0A6YYF3 556 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 MSCO60682 206 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 COL9A1P20849 921 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 BACE1P56817 501 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 HERVK_113P62684 666 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 SMAD3P84022 425 aaKnown RBP14.39□□□□□ -0.11
RNF4-216ENST00000511859 GTF3C2Q8WUA4 911 aaPredicted RBP14.39□□□□□ -0.11
RNF4-216ENST00000511859 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 USP44Q9H0E7 712 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 TMOD4Q9NZQ9 345 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 ABCF2Q9UG63 623 aa14.39□□□□□ -0.11
RNF4-216ENST00000511859 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
RNF4-216ENST00000511859 C19orf81C9J6K1 198 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 CIAO1O76071 339 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 PHKA1P46020 1223 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 SHHQ15465 462 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 MORN1Q5T089 497 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 GPR142Q7Z601 462 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 LPAR1Q92633 364 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 TXNRD2Q9NNW7 524 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 RBPJLQ9UBG7 517 aa14.38□□□□□ -0.11
RNF4-216ENST00000511859 HERC5Q9UII4 1024 aaKnown RBP14.38□□□□□ -0.11
RNF4-216ENST00000511859 MROH7-TTC4A0A0A0MT08 1334 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
RNF4-216ENST00000511859 FAM196BA6NMK8 535 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 RHBDL3P58872 404 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 ERVK-9P63128 1117 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 ERVK-24P63145 666 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 CCL14Q16627 93 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 Q3C1V9 767 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 PLEKHH3Q7Z736 793 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 APBA2Q99767 749 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 FRMPD3Q5JV73 1810 aa14.37□□□□□ -0.11
RNF4-216ENST00000511859 DNM1LO00429 736 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms