RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 NOL10Q9BSC4 688 aaKnown RBP18.73■□□□□ 0.59
COL1A1-213ENST00000511732 ANTXR1Q9H6X2 564 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 BCRP11274 1271 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 MS4A1P11836 297 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 DYNLL1P63167 89 aaKnown RBP18.72■□□□□ 0.59
COL1A1-213ENST00000511732 KIF22Q14807 665 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 GADL1Q6ZQY3 521 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 ERC1Q8IUD2 1116 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 MAPKAPK5Q8IW41 473 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 TRIM47Q96LD4 638 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 PARK7Q99497 189 aaKnown RBP18.72■□□□□ 0.59
COL1A1-213ENST00000511732 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 FLT1P17948 1338 aa18.72■□□□□ 0.59
COL1A1-213ENST00000511732 MGAMO43451 1857 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 PLCG2P16885 1265 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 CAP2P40123 477 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 PSMC4P43686 418 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 DDX19BQ9UMR2 479 aa18.71■□□□□ 0.59
COL1A1-213ENST00000511732 IGSF3O75054 1194 aa18.7■□□□□ 0.58
COL1A1-213ENST00000511732 IDH1O75874 414 aaKnown RBP18.7■□□□□ 0.58
COL1A1-213ENST00000511732 GNRH1P01148 92 aa18.7■□□□□ 0.58
COL1A1-213ENST00000511732 CYP7A1P22680 504 aa18.7■□□□□ 0.58
COL1A1-213ENST00000511732 RPAP2Q8IXW5 612 aaPredicted RBP18.7■□□□□ 0.58
COL1A1-213ENST00000511732 SH3TC2Q8TF17 1288 aa18.7■□□□□ 0.58
COL1A1-213ENST00000511732 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
COL1A1-213ENST00000511732 HERC5Q9UII4 1024 aaKnown RBP18.7■□□□□ 0.58
COL1A1-213ENST00000511732 LOC285556D6RIA3 1793 aa18.7■□□□□ 0.58
COL1A1-213ENST00000511732 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-213ENST00000511732 OSBPP22059 807 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 JAG1P78504 1218 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 SPP2Q13103 211 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 TREML2Q5T2D2 321 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
COL1A1-213ENST00000511732 MAGEB6Q8N7X4 407 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 DHX36Q9H2U1 1008 aaKnown RBP18.69■□□□□ 0.58
COL1A1-213ENST00000511732 SRRDQ9UH36 339 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 PALD1Q9ULE6 856 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 SLC45A1Q9Y2W3 748 aa18.69■□□□□ 0.58
COL1A1-213ENST00000511732 APBB1O00213 710 aa18.68■□□□□ 0.58
COL1A1-213ENST00000511732 MYCP01106 439 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-213ENST00000511732 SHROOM1Q2M3G4 852 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-213ENST00000511732 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
COL1A1-213ENST00000511732 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
COL1A1-213ENST00000511732 ZNF280CQ8ND82 737 aa18.68■□□□□ 0.58
COL1A1-213ENST00000511732 AGTPBP1Q9UPW5 1226 aa18.68■□□□□ 0.58
COL1A1-213ENST00000511732 MYH1P12882 1939 aa18.68■□□□□ 0.58
COL1A1-213ENST00000511732 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-213ENST00000511732 PRMT2P55345 433 aa18.67■□□□□ 0.58
COL1A1-213ENST00000511732 SLC4A8Q2Y0W8 1093 aa18.67■□□□□ 0.58
COL1A1-213ENST00000511732 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
COL1A1-213ENST00000511732 USP17L5A8MUK1 530 aa18.66■□□□□ 0.58
COL1A1-213ENST00000511732 FOXP4Q8IVH2 680 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-213ENST00000511732 KIF1BPQ96EK5 621 aa18.66■□□□□ 0.58
COL1A1-213ENST00000511732 MYPNQ86TC9 1320 aa18.66■□□□□ 0.58
COL1A1-213ENST00000511732 KIAA0100Q14667 2235 aaKnown RBP18.65■□□□□ 0.58
COL1A1-213ENST00000511732 PDE4DIPQ5VU43 2346 aa18.65■□□□□ 0.58
COL1A1-213ENST00000511732 HMGCS2P54868 508 aa18.65■□□□□ 0.58
COL1A1-213ENST00000511732 PRKCZQ05513 592 aa18.65■□□□□ 0.58
COL1A1-213ENST00000511732 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
COL1A1-213ENST00000511732 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
COL1A1-213ENST00000511732 PROCA1Q8NCQ7 364 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-213ENST00000511732 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
COL1A1-213ENST00000511732 GABRQQ9UN88 632 aa18.65■□□□□ 0.58
COL1A1-213ENST00000511732 MKI67P46013 3256 aaKnown RBP18.64■□□□□ 0.58
COL1A1-213ENST00000511732 HMMRO75330 724 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 GDF11O95390 407 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 HOXD10P28358 340 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 FCGRTP55899 365 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 MTFR1Q15390 333 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 SH3D19Q5HYK7 790 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 PRPF38BQ5VTL8 546 aaKnown RBP18.64■□□□□ 0.57
COL1A1-213ENST00000511732 CRACR2BQ8N4Y2 399 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-213ENST00000511732 SMCR8Q8TEV9 937 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-213ENST00000511732 RIOK1Q9BRS2 568 aaKnown RBP18.64■□□□□ 0.57
COL1A1-213ENST00000511732 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
COL1A1-213ENST00000511732 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
COL1A1-213ENST00000511732 ANKRD13CQ8N6S4 541 aa18.63■□□□□ 0.57
COL1A1-213ENST00000511732 RAET1EQ8TD07 263 aa18.63■□□□□ 0.57
COL1A1-213ENST00000511732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL1A1-213ENST00000511732 EDC3Q96F86 508 aaKnown RBP18.63■□□□□ 0.57
COL1A1-213ENST00000511732 WDR18Q9BV38 432 aa18.63■□□□□ 0.57
COL1A1-213ENST00000511732 AS3MTQ9HBK9 375 aa18.63■□□□□ 0.57
COL1A1-213ENST00000511732 RAB11FIP3O75154 756 aa18.62■□□□□ 0.57
COL1A1-213ENST00000511732 HLA-DOAP06340 250 aa18.62■□□□□ 0.57
COL1A1-213ENST00000511732 ASNSP08243 561 aa18.62■□□□□ 0.57
COL1A1-213ENST00000511732 IFIT2P09913 472 aaKnown RBP18.62■□□□□ 0.57
COL1A1-213ENST00000511732 USP5P45974 858 aa18.62■□□□□ 0.57
COL1A1-213ENST00000511732 MTMR2Q13614 643 aa18.62■□□□□ 0.57
COL1A1-213ENST00000511732 ZBTB21Q9ULJ3 1066 aa18.62■□□□□ 0.57
COL1A1-213ENST00000511732 GOLIM4O00461 696 aa18.61■□□□□ 0.57
COL1A1-213ENST00000511732 PDE6AP16499 860 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms