RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 CA12O43570 354 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 CTNND1O60716 968 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 TM4SF4P48230 202 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 INHBEP58166 350 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 SREBF2Q12772 1141 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 NOL9Q5SY16 702 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 ERICH6BQ5W0A0 696 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 CENPQQ7L2Z9 268 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 METTL16Q86W50 562 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 CRACR2BQ8N4Y2 399 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 SDR42E1Q8WUS8 393 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 RILPL2Q969X0 211 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 STRBPQ96SI9 672 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 DCP1AQ9NPI6 582 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 PICK1Q9NRD5 415 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 MCM9Q9NXL9 1143 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 SLC4A4Q9Y6R1 1079 aa8.6□□□□□ -1.03
PDLIM5-215ENST00000511586 FAM196BA6NMK8 535 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 PRKAB2O43741 272 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 SLURP2P0DP57 97 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 GNAT2P19087 354 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 PDE4AP27815 886 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 GJA5P36382 358 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 PPATQ06203 517 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 SLC4A8Q2Y0W8 1093 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 ZMYM1Q5SVZ6 1142 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 AMOTL1Q8IY63 956 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 SCYL3Q8IZE3 742 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 CNKSR2Q8WXI2 1034 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 EHD4Q9H223 541 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 SERPINB13Q9UIV8 391 aa8.59□□□□□ -1.03
PDLIM5-215ENST00000511586 AK9Q5TCS8 1911 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 IRF6O14896 467 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 FOXN1O15353 648 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 GPAA1O43292 621 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 APPP05067 770 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 PTPRAP18433 802 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 CAP2P40123 477 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 CTCFP49711 727 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 PLCD1P51178 756 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 GTF2A2P52657 109 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 PPIL2Q13356 520 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 SNAPC2Q13487 334 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 OTUD7BQ6GQQ9 843 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 GIMAP6Q6P9H5 292 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 MS4A4AQ96JQ5 239 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 SEC62Q99442 399 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 RNF186Q9NXI6 227 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 SAGE1Q9NXZ1 904 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 TAOK2Q9UL54 1235 aa8.58□□□□□ -1.04
PDLIM5-215ENST00000511586 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 GSG1L2A8MUP6 293 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 PATL2C9JE40 543 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 USP17L21D6R901 530 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 M0R2C6 588 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 CXCL11O14625 94 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 TRPA1O75762 1119 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 ALDH1A1P00352 501 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 CETPP11597 493 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 SDSP20132 328 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 GABPAQ06546 454 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 MCMDC2Q4G0Z9 681 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 TATDN1Q6P1N9 297 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 CTR9Q6PD62 1173 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 IFNL1Q8IU54 200 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 TBC1D2Q9BYX2 928 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 NACAP1Q9BZK3 213 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 DNAJC18Q9H819 358 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 GINM1Q9NU53 330 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 AFG3L2Q9Y4W6 797 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 ZHX2Q9Y6X8 837 aa8.57□□□□□ -1.04
PDLIM5-215ENST00000511586 CCL15-CCL14A0A0B4J2E2 113 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 USP17L5A8MUK1 530 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 HIP1O00291 1037 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 ASNSP08243 561 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 CYP2D6P10635 497 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 TDO2P48775 406 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 RRP1BQ14684 758 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 CCL15Q16663 113 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 CERKLQ49MI3 558 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 SBK1Q52WX2 424 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 TTC22Q5TAA0 569 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 C12orf60Q5U649 245 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 FAM227BQ96M60 508 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 PTPN18Q99952 460 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 ARPP21Q9UBL0 812 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 SWAP70Q9UH65 585 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 PCNTO95613 3336 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
PDLIM5-215ENST00000511586 OTOFQ9HC10 1997 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 MYH7P12883 1935 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 IGF2BP3O00425 579 aaKnown RBP eCLIP8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 TBC1D8O95759 1140 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms