RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 PTPRNQ16849 979 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 CRY2Q49AN0 593 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 DGLUCYQ7Z3D6 616 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 CYP4X1Q8N118 509 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 TSC1Q92574 1164 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 SIN3AQ96ST3 1273 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 FAM117AQ9C073 453 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 DBNDD1Q9H9R9 158 aa8.46□□□□□ -1.06
CLCN3-207ENST00000511092 SH2B1Q9NRF2 756 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-207ENST00000511092 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
CLCN3-207ENST00000511092 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 GNRH1P01148 92 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-207ENST00000511092 RMDN1Q96DB5 314 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 RTFDC1Q9BY42 306 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-207ENST00000511092 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 WASHC2AQ641Q2 1341 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 SPEGQ15772 3267 aa8.45□□□□□ -1.06
CLCN3-207ENST00000511092 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
CLCN3-207ENST00000511092 LRRC37AA6NMS7 1700 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 A0A087WZG4 1122 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 SMCPP49901 116 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-207ENST00000511092 WNT7BP56706 349 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 SLC39A6Q13433 755 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 QPCTQ16769 361 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 AAK1Q2M2I8 961 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
CLCN3-207ENST00000511092 COL4A3Q01955 1670 aa8.43□□□□□ -1.06
CLCN3-207ENST00000511092 LILRB3O75022 631 aa8.43□□□□□ -1.06
CLCN3-207ENST00000511092 RPS12P25398 132 aaKnown RBP8.43□□□□□ -1.06
CLCN3-207ENST00000511092 NF2P35240 595 aa8.43□□□□□ -1.06
CLCN3-207ENST00000511092 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
CLCN3-207ENST00000511092 NEUROD2Q15784 382 aa8.43□□□□□ -1.06
CLCN3-207ENST00000511092 TIFAQ96CG3 184 aa8.43□□□□□ -1.06
CLCN3-207ENST00000511092 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLCN3-207ENST00000511092 ERC2O15083 957 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 ADCY3O60266 1144 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 TLR2O60603 784 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 CTHP32929 405 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 KCNH2Q12809 1159 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 SKIV2LQ15477 1246 aaKnown RBP8.42□□□□□ -1.06
CLCN3-207ENST00000511092 LYPD8Q6UX82 237 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 SNIP1Q8TAD8 396 aaKnown RBP8.42□□□□□ -1.06
CLCN3-207ENST00000511092 ALG13Q9NP73 1137 aaKnown RBP8.42□□□□□ -1.06
CLCN3-207ENST00000511092 FLT4P35916 1363 aa8.42□□□□□ -1.06
CLCN3-207ENST00000511092 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 TTC24A2A3L6 582 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 PRR23AA6NEV1 266 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 ST8SIA5O15466 376 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 ZNF280AP59817 542 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.068e-8■■■■□ 19.8
CLCN3-207ENST00000511092 NBPF9Q3BBW0 867 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 DPP8Q6V1X1 898 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 SUPT20HQ8NEM7 779 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 RPGRQ92834 1020 aaKnown RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 COG3Q96JB2 828 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 CPA4Q9UI42 421 aa8.41□□□□□ -1.06
CLCN3-207ENST00000511092 EP300Q09472 2414 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-207ENST00000511092 ANKRD17O75179 2603 aaKnown RBP8.4□□□□□ -1.06
CLCN3-207ENST00000511092 CCL15-CCL14A0A0B4J2E2 113 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 HOXA10P31260 410 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-207ENST00000511092 SKOR1P84550 965 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 CCL15Q16663 113 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 MRGPRX2Q96LB1 330 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 RNPC3Q96LT9 517 aaKnown RBP8.4□□□□□ -1.06
CLCN3-207ENST00000511092 SLC12A5Q9H2X9 1139 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
CLCN3-207ENST00000511092 RLFQ13129 1914 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 NUP98P52948 1817 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 ECM29Q5VYK3 1845 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 KIF20BQ96Q89 1820 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 KRT38O76015 456 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 COL6A1P12109 1028 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 SMPD1P17405 629 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 EPHB4P54760 987 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 HDGFL2Q7Z4V5 671 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-207ENST00000511092 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-207ENST00000511092 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 MYOZ2Q9NPC6 264 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 FRYQ5TBA9 3013 aa8.39□□□□□ -1.07
CLCN3-207ENST00000511092 AXIN1O15169 862 aa8.38□□□□□ -1.07
CLCN3-207ENST00000511092 TPTE2Q6XPS3 522 aa8.38□□□□□ -1.07
CLCN3-207ENST00000511092 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-207ENST00000511092 BAP1Q92560 729 aa8.38□□□□□ -1.07
CLCN3-207ENST00000511092 BADQ92934 168 aa8.38□□□□□ -1.07
CLCN3-207ENST00000511092 ZKSCAN4Q969J2 545 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-207ENST00000511092 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
CLCN3-207ENST00000511092 TERF2IPQ9NYB0 399 aa8.38□□□□□ -1.07
CLCN3-207ENST00000511092 PER1O15534 1290 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ECE2O60344 883 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms