RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 MAGEB6Q8N7X4 407 aa27.99■■■□□ 2.07
SNF8-209ENST00000510558 DHX36Q9H2U1 1008 aaKnown RBP27.99■■■□□ 2.07
SNF8-209ENST00000510558 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.99■■■□□ 2.07
SNF8-209ENST00000510558 PTPN22Q9Y2R2 807 aa27.99■■■□□ 2.07
SNF8-209ENST00000510558 A0A0G2JLL6 359 aaPredicted RBP27.98■■■□□ 2.07
SNF8-209ENST00000510558 DYNLL1P63167 89 aaKnown RBP27.98■■■□□ 2.07
SNF8-209ENST00000510558 MAP3K12Q12852 859 aa27.98■■■□□ 2.07
SNF8-209ENST00000510558 PRRT2Q7Z6L0 340 aaPredicted RBP27.98■■■□□ 2.07
SNF8-209ENST00000510558 BCL11AQ9H165 835 aa27.98■■■□□ 2.07
SNF8-209ENST00000510558 PI4KBQ9UBF8 816 aa27.98■■■□□ 2.07
SNF8-209ENST00000510558 HERC5Q9UII4 1024 aaKnown RBP27.98■■■□□ 2.07
SNF8-209ENST00000510558 MYH1P12882 1939 aa27.98■■■□□ 2.07
SNF8-209ENST00000510558 ARHGEF6Q15052 776 aa27.97■■■□□ 2.07
SNF8-209ENST00000510558 GPAT2Q6NUI2 795 aa27.96■■■□□ 2.07
SNF8-209ENST00000510558 FASTKD5Q7L8L6 764 aaKnown RBP27.96■■■□□ 2.07
SNF8-209ENST00000510558 CCDC84Q86UT8 332 aaPredicted RBP27.96■■■□□ 2.07
SNF8-209ENST00000510558 MIGA1Q8NAN2 632 aa27.96■■■□□ 2.07
SNF8-209ENST00000510558 ADGRA2Q96PE1 1338 aa27.95■■■□□ 2.07
SNF8-209ENST00000510558 TTF1Q15361 905 aaPredicted RBP27.95■■■□□ 2.06
SNF8-209ENST00000510558 TMED8Q6PL24 325 aaPredicted RBP27.95■■■□□ 2.06
SNF8-209ENST00000510558 C17orf99Q6UX52 265 aa27.95■■■□□ 2.06
SNF8-209ENST00000510558 CERS3Q8IU89 383 aa27.95■■■□□ 2.06
SNF8-209ENST00000510558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.95■■■□□ 2.06
SNF8-209ENST00000510558 TRIM75PA6NK02 468 aa27.94■■■□□ 2.06
SNF8-209ENST00000510558 CAP2P40123 477 aa27.94■■■□□ 2.06
SNF8-209ENST00000510558 LACTBP83111 547 aaPredicted RBP27.94■■■□□ 2.06
SNF8-209ENST00000510558 RRP1BQ14684 758 aaKnown RBP27.94■■■□□ 2.06
SNF8-209ENST00000510558 GADL1Q6ZQY3 521 aa27.94■■■□□ 2.06
SNF8-209ENST00000510558 CPA4Q9UI42 421 aa27.94■■■□□ 2.06
SNF8-209ENST00000510558 PALD1Q9ULE6 856 aa27.94■■■□□ 2.06
SNF8-209ENST00000510558 KIF22Q14807 665 aa27.93■■■□□ 2.06
SNF8-209ENST00000510558 PARK7Q99497 189 aaKnown RBP27.93■■■□□ 2.06
SNF8-209ENST00000510558 SAP30BPQ9UHR5 308 aaKnown RBP27.93■■■□□ 2.06
SNF8-209ENST00000510558 DNAJC2Q99543 621 aaKnown RBP27.92■■■□□ 2.06
SNF8-209ENST00000510558 ARHGAP39Q9C0H5 1083 aa27.92■■■□□ 2.06
SNF8-209ENST00000510558 LOC285556D6RIA3 1793 aa27.91■■■□□ 2.06
SNF8-209ENST00000510558 GOLIM4O00461 696 aa27.91■■■□□ 2.06
SNF8-209ENST00000510558 METTL16Q86W50 562 aaKnown RBP27.91■■■□□ 2.06
SNF8-209ENST00000510558 FOXP4Q8IVH2 680 aaPredicted RBP27.91■■■□□ 2.06
SNF8-209ENST00000510558 CRACR2BQ8N4Y2 399 aaPredicted RBP27.91■■■□□ 2.06
SNF8-209ENST00000510558 TRIM34Q9BYJ4 488 aa27.91■■■□□ 2.06
SNF8-209ENST00000510558 DNAJC18Q9H819 358 aa27.91■■■□□ 2.06
SNF8-209ENST00000510558 HLA-DOAP06340 250 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 CYP2C8P10632 490 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 USP5P45974 858 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 TBC1D2Q9BYX2 928 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 LRRCC1Q9C099 1032 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 SLC45A1Q9Y2W3 748 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 HTTP42858 3142 aa27.9■■■□□ 2.06
SNF8-209ENST00000510558 PDE6AP16499 860 aa27.89■■■□□ 2.06
SNF8-209ENST00000510558 SPP2Q13103 211 aa27.89■■■□□ 2.06
SNF8-209ENST00000510558 SLC9C2Q5TAH2 1124 aa27.89■■■□□ 2.06
SNF8-209ENST00000510558 ZNF280CQ8ND82 737 aa27.89■■■□□ 2.06
SNF8-209ENST00000510558 USP17L5A8MUK1 530 aa27.88■■■□□ 2.05
SNF8-209ENST00000510558 MGAMO43451 1857 aa27.88■■■□□ 2.05
SNF8-209ENST00000510558 SLC4A8Q2Y0W8 1093 aa27.88■■■□□ 2.05
SNF8-209ENST00000510558 DDX60LQ5H9U9 1706 aaKnown RBP27.88■■■□□ 2.05
SNF8-209ENST00000510558 NAV1Q8NEY1 1877 aa27.88■■■□□ 2.05
SNF8-209ENST00000510558 EDC3Q96F86 508 aaKnown RBP27.88■■■□□ 2.05
SNF8-209ENST00000510558 RIOK1Q9BRS2 568 aaKnown RBP27.88■■■□□ 2.05
SNF8-209ENST00000510558 BOLA2Q9H3K6 86 aa27.88■■■□□ 2.05
SNF8-209ENST00000510558 PTCH2Q9Y6C5 1203 aa27.88■■■□□ 2.05
SNF8-209ENST00000510558 MYH7P12883 1935 aa27.87■■■□□ 2.05
SNF8-209ENST00000510558 ECM2O94769 699 aaPredicted RBP27.87■■■□□ 2.05
SNF8-209ENST00000510558 ATP5JP18859 108 aa27.87■■■□□ 2.05
SNF8-209ENST00000510558 ARMC5Q96C12 935 aa27.87■■■□□ 2.05
SNF8-209ENST00000510558 AGTPBP1Q9UPW5 1226 aa27.87■■■□□ 2.05
SNF8-209ENST00000510558 RBBP6Q7Z6E9 1792 aaKnown RBP27.86■■■□□ 2.05
SNF8-209ENST00000510558 MAGEB6P1A0A0J9YX57 407 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 SMARCA5O60264 1052 aaPredicted RBP27.86■■■□□ 2.05
SNF8-209ENST00000510558 GNRH1P01148 92 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 BCRP11274 1271 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 CTGFP29279 349 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 PROCA1Q8NCQ7 364 aaPredicted RBP27.86■■■□□ 2.05
SNF8-209ENST00000510558 AS3MTQ9HBK9 375 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 PAG1Q9NWQ8 432 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 ZNF532Q9HCE3 1301 aa27.86■■■□□ 2.05
SNF8-209ENST00000510558 ASNSP08243 561 aa27.85■■■□□ 2.05
SNF8-209ENST00000510558 PSMC4P43686 418 aa27.85■■■□□ 2.05
SNF8-209ENST00000510558 TCRBV5S4A2TA0A5A2 114 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 GDF11O95390 407 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 HMGCS2P54868 508 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 JAG1P78504 1218 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 TREML2Q5T2D2 321 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 TRIM47Q96LD4 638 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 HAUS7Q99871 368 aa27.84■■■□□ 2.05
SNF8-209ENST00000510558 PRMT2P55345 433 aa27.83■■■□□ 2.05
SNF8-209ENST00000510558 SHROOM1Q2M3G4 852 aaPredicted RBP27.83■■■□□ 2.05
SNF8-209ENST00000510558 SLC9C1Q4G0N8 1177 aa27.83■■■□□ 2.05
SNF8-209ENST00000510558 SMCR8Q8TEV9 937 aaPredicted RBP27.83■■■□□ 2.05
SNF8-209ENST00000510558 WDR18Q9BV38 432 aa27.83■■■□□ 2.05
SNF8-209ENST00000510558 DCTPP1Q9H773 170 aa27.83■■■□□ 2.05
SNF8-209ENST00000510558 GINM1Q9NU53 330 aa27.83■■■□□ 2.05
SNF8-209ENST00000510558 KIAA0100Q14667 2235 aaKnown RBP27.82■■■□□ 2.04
SNF8-209ENST00000510558 FMNL1O95466 1100 aaPredicted RBP27.82■■■□□ 2.04
SNF8-209ENST00000510558 RRP1P56182 461 aaKnown RBP27.82■■■□□ 2.04
SNF8-209ENST00000510558 SH3D19Q5HYK7 790 aa27.82■■■□□ 2.04
SNF8-209ENST00000510558 TTC6Q86TZ1 520 aa27.82■■■□□ 2.04
SNF8-209ENST00000510558 CRNKL1Q9BZJ0 848 aaKnown RBP27.82■■■□□ 2.04
SNF8-209ENST00000510558 EHD4Q9H223 541 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms