RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 LCORLQ8N3X6 602 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 BRI3BPQ8WY22 251 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 OTUD5Q96G74 571 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 DNAJC18Q9H819 358 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 KCNH4Q9UQ05 1017 aa14.21□□□□□ -0.13
HMGXB3-203ENST00000510472 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 PTPRAP18433 802 aa14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 LNPKQ9C0E8 428 aa14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 PUS7LQ9H0K6 701 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 MYO5AQ9Y4I1 1855 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-203ENST00000510472 MAST2Q6P0Q8 1798 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 PRKAB2O43741 272 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 ALDH1A1P00352 501 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 CAP2P40123 477 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 USP5P45974 858 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 GTF2A2P52657 109 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 MOGSQ13724 837 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 PLEKHM2Q8IWE5 1019 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 OSBP2Q969R2 916 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 CRNKL1Q9BZJ0 848 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 EHD4Q9H223 541 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 R3HDMLQ9H3Y0 253 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 OSBPL3Q9H4L5 887 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 ARMT1Q9H993 441 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 DCP1AQ9NPI6 582 aaPredicted RBP14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 SAP30BPQ9UHR5 308 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 DOCK2Q92608 1830 aa14.19□□□□□ -0.14
HMGXB3-203ENST00000510472 CXCL11O14625 94 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 MBD4O95243 580 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 ZFYP08048 801 aaPredicted RBP14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 PLCD1P51178 756 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 JAG1P78504 1218 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 GABPAQ06546 454 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 SNAPC2Q13487 334 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 STRBPQ96SI9 672 aaKnown RBP14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 AFG3L2Q9Y4W6 797 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 ZHX2Q9Y6X8 837 aa14.18□□□□□ -0.14
HMGXB3-203ENST00000510472 CCL15-CCL14A0A0B4J2E2 113 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 TBC1D8O95759 1140 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 CETPP11597 493 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 CCL15Q16663 113 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 TATDN1Q6P1N9 297 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 TTC6Q86TZ1 520 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 APPBP2Q92624 585 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 ATP8A2Q9NTI2 1148 aa14.17□□□□□ -0.14
HMGXB3-203ENST00000510472 OTOFQ9HC10 1997 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 BTBD19C9JJ37 291 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 EVX2Q03828 476 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 ZMYM1Q5SVZ6 1142 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 TICAM2Q86XR7 235 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 PICK1Q9NRD5 415 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 GINM1Q9NU53 330 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 SERPINB13Q9UIV8 391 aa14.16□□□□□ -0.14
HMGXB3-203ENST00000510472 GSG1L2A8MUP6 293 aa14.15□□□□□ -0.14
HMGXB3-203ENST00000510472 OTUD7BQ6GQQ9 843 aa14.15□□□□□ -0.14
HMGXB3-203ENST00000510472 GPAT2Q6NUI2 795 aa14.15□□□□□ -0.14
HMGXB3-203ENST00000510472 ZCCHC17Q9NP64 241 aaKnown RBP14.15□□□□□ -0.14
HMGXB3-203ENST00000510472 MCM9Q9NXL9 1143 aa14.15□□□□□ -0.14
HMGXB3-203ENST00000510472 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
HMGXB3-203ENST00000510472 A0A0G2JLL6 359 aaPredicted RBP14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 GPR25O00155 361 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 CYP2D6P10635 497 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 PDE4AP27815 886 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 SHMT1P34896 483 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 SHROOM1Q2M3G4 852 aaPredicted RBP14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 SLC4A8Q2Y0W8 1093 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 LRRFIP1Q32MZ4 808 aaKnown RBP14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 C12orf60Q5U649 245 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 PRRT2Q7Z6L0 340 aaPredicted RBP14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 ANKRD23Q86SG2 305 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 CCDC84Q86UT8 332 aaPredicted RBP14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 WDR18Q9BV38 432 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 SLC4A4Q9Y6R1 1079 aa14.14□□□□□ -0.15
HMGXB3-203ENST00000510472 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 USP17L12C9JPN9 530 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 USP17L21D6R901 530 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 SMIM22K7EJ46 135 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 M0R2C6 588 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 POLR3DP05423 398 aaPredicted RBP14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 ASNSP08243 561 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 CRHR2Q13324 411 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 GIMAP6Q6P9H5 292 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 CTR9Q6PD62 1173 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 SEC62Q99442 399 aaKnown RBP14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 FSD1Q9BTV5 496 aa14.13□□□□□ -0.15
HMGXB3-203ENST00000510472 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms