RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GNL3LQ9NVN8 582 aaKnown RBP20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 ZNF652Q9Y2D9 606 aa20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 THRAP3Q9Y2W1 955 aaKnown RBP20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 KIF2AO00139 706 aaPredicted RBP20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 CBFA2T2O43439 604 aa20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 GUCY1A2P33402 732 aa20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 STK11IPQ8N1F8 1099 aa20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 CRACR2BQ8N4Y2 399 aaPredicted RBP20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 TRMT1Q9NXH9 659 aaKnown RBP20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 COL16A1Q07092 1604 aaPredicted RBP20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 LONRF3Q496Y0 759 aa20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 ELOA2Q8IYF1 753 aaPredicted RBP20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 NUP133Q8WUM0 1156 aa20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 ABCF2Q9UG63 623 aa20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 KCNJ14Q9UNX9 436 aa20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
CCHCR1-228ENST00000509552 PPP4R3BQ5MIZ7 849 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 METTL16Q86W50 562 aaKnown RBP20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 ZNF654Q8IZM8 581 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 FANCBQ8NB91 859 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 ESR2Q92731 530 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 MAGEB6P1A0A0J9YX57 407 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 MYO1BO43795 1136 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 ITPK1Q13572 414 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
CCHCR1-228ENST00000509552 MINDY4BA8MYZ0 360 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 SERPINC1P01008 464 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 PPP2R5BQ15173 497 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 ARMCX5Q6P1M9 558 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 CEP131Q9UPN4 1083 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 IQSEC3Q9UPP2 1182 aaPredicted RBP20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 SPATA31A1Q5TZJ5 1347 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 UBASH3AP57075 661 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 NCBP1Q09161 790 aaKnown RBP20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 KIF18AQ8NI77 898 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 ANAPC4Q9UJX5 808 aa20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 COL22A1Q8NFW1 1626 aaPredicted RBP20.61■□□□□ 0.89
CCHCR1-228ENST00000509552 KCNJ6P48051 423 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 TOB1P50616 345 aaPredicted RBP20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 AKAP17AQ02040 695 aaKnown RBP20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 ANKRD18AQ8IVF6 992 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 PCDHA5Q9Y5H7 936 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 LAMB2P55268 1798 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 ATP1A3P13637 1013 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 PTPREP23469 700 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 ZNF804BA4D1E1 1349 aa20.6■□□□□ 0.89
CCHCR1-228ENST00000509552 XBP1P17861 261 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 CAVIN4Q5BKX8 364 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 HSD3B7Q9H2F3 369 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 FBXO2Q9UK22 296 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 TNKSO95271 1327 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 RREB1Q92766 1687 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 PSDA5PKW4 1024 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 UBE4AQ14139 1066 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 ADGRA1Q86SQ6 560 aa20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 CMTR1Q8N1G2 835 aaKnown RBP20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 MARCH10Q8NA82 808 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 RNF26Q9BY78 433 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-228ENST00000509552 KDM4FA0A1W2PPD8 638 aa20.58■□□□□ 0.89
CCHCR1-228ENST00000509552 GYG1P46976 350 aa20.58■□□□□ 0.89
CCHCR1-228ENST00000509552 CFAP100Q494V2 611 aa20.58■□□□□ 0.89
CCHCR1-228ENST00000509552 SPECC1Q5M775 1068 aa20.58■□□□□ 0.89
CCHCR1-228ENST00000509552 ZNF579Q8NAF0 562 aaKnown RBP20.58■□□□□ 0.89
CCHCR1-228ENST00000509552 SMARCC1Q92922 1105 aaPredicted RBP20.58■□□□□ 0.89
CCHCR1-228ENST00000509552 BCL9LQ86UU0 1499 aa20.58■□□□□ 0.88
CCHCR1-228ENST00000509552 NR5A1Q13285 461 aa20.58■□□□□ 0.88
CCHCR1-228ENST00000509552 CLEC4GQ6UXB4 293 aa20.58■□□□□ 0.88
CCHCR1-228ENST00000509552 FOXP4Q8IVH2 680 aaPredicted RBP20.58■□□□□ 0.88
CCHCR1-228ENST00000509552 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 MDM2Q00987 491 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 POSTNQ15063 836 aa20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 SEC23AQ15436 765 aa20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 E4F1Q66K89 784 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 DACH1Q9UI36 760 aa20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 SRPRBQ9Y5M8 271 aaKnown RBP20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 ROBO1Q9Y6N7 1651 aa20.57■□□□□ 0.88
CCHCR1-228ENST00000509552 POLR2DO15514 142 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 KANK3Q6NY19 840 aa20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 BSDC1Q9NW68 430 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 PCDHB6Q9Y5E3 794 aa20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 CCP110O43303 1012 aa20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 TUBB4AP04350 444 aa20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 PPP1R13BQ96KQ4 1090 aa20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 ZSCAN10Q96SZ4 725 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 RIOK1Q9BRS2 568 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 FANCLQ9NW38 375 aa20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 CGNQ9P2M7 1197 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-228ENST00000509552 MYH14Q7Z406 1995 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 SF3B3Q15393 1217 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 CATIPQ7Z7H3 387 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 CABP5Q9NP86 173 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 FOXN1O15353 648 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 ATP2B1P20020 1258 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 GRIN1Q05586 938 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms