RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 ARHGAP39Q9C0H5 1083 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 DHX36Q9H2U1 1008 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 DBNLQ9UJU6 430 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 EXOC6BQ9Y2D4 811 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 PTCH2Q9Y6C5 1203 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 PDE4DIPQ5VU43 2346 aa12.32□□□□□ -0.44
UBE2D3-227ENST00000508818 RFX7Q2KHR2 1363 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 ATRNL1Q5VV63 1379 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 A0A0G2JLL6 359 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 IDH1O75874 414 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 MYCP01106 439 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 SLURP2P0DP57 97 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 CYP2C8P10632 490 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 CYP7A1P22680 504 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 PPP4CP60510 307 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 CRACR2BQ8N4Y2 399 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 SMCR8Q8TEV9 937 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
UBE2D3-227ENST00000508818 APBB1O00213 710 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 FCGRTP55899 365 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 CAP1Q01518 475 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 MAP3K12Q12852 859 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 SPP2Q13103 211 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 MOGSQ13724 837 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 FOXP4Q8IVH2 680 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 RAET1EQ8TD07 263 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 AS3MTQ9HBK9 375 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 COG6Q9Y2V7 657 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
UBE2D3-227ENST00000508818 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 CAP2P40123 477 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 USP5P45974 858 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 PABPC4Q13310 644 aaKnown RBP eCLIP12.29□□□□□ -0.444e-7■■■■□ 24.1
UBE2D3-227ENST00000508818 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 ZNF280CQ8ND82 737 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 IL1RAPL2Q9NP60 686 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 SRRDQ9UH36 339 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 SLC45A1Q9Y2W3 748 aa12.29□□□□□ -0.44
UBE2D3-227ENST00000508818 USP17L5A8MUK1 530 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 OSBPP22059 807 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 TTF1Q15361 905 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 MAGEB6Q8N7X4 407 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 PALD1Q9ULE6 856 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 AGTPBP1Q9UPW5 1226 aa12.28□□□□□ -0.44
UBE2D3-227ENST00000508818 COL2A1P02458 1487 aaPredicted RBP12.27□□□□□ -0.44
UBE2D3-227ENST00000508818 ASNSP08243 561 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 BCRP11274 1271 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 DYNLL1P63167 89 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 TMED8Q6PL24 325 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 TMOD4Q9NZQ9 345 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 FLT1P17948 1338 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 MYPNQ86TC9 1320 aa12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 KIAA0100Q14667 2235 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-227ENST00000508818 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
UBE2D3-227ENST00000508818 GRK4P32298 578 aa12.26□□□□□ -0.45
UBE2D3-227ENST00000508818 HMGCS2P54868 508 aa12.26□□□□□ -0.45
UBE2D3-227ENST00000508818 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
UBE2D3-227ENST00000508818 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
UBE2D3-227ENST00000508818 ADGRA2Q96PE1 1338 aa12.26□□□□□ -0.45
UBE2D3-227ENST00000508818 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 CTGFP29279 349 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 UBXN2AP68543 259 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 TREML2Q5T2D2 321 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 TTC6Q86TZ1 520 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 COA7Q96BR5 231 aa12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 DNAJC2Q99543 621 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-227ENST00000508818 ANTXR1Q9H6X2 564 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms