RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 APAF1O14727 1248 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 CAPN5O15484 640 aaPredicted RBP11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 DDX58O95786 925 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 NBPF9Q3BBW0 867 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 DACT2Q5SW24 774 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 CCDC85AQ96PX6 553 aaPredicted RBP11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
COL4A3BP-206ENST00000508809 MED23Q9ULK4 1368 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 UBE2Q2LH0YL09 131 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 WNT10BO00744 389 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 FSHRP23945 695 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 CTSWP56202 376 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 SOX10P56693 466 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 NBPF20Q3BBV1 942 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 STRIP1Q5VSL9 837 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 MOB2Q70IA6 237 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 ADAM32Q8TC27 787 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 MAP3K2Q9Y2U5 619 aa11.06□□□□□ -0.64
COL4A3BP-206ENST00000508809 BRCA2P51587 3418 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 PI4KAP2A4QPH2 592 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 PRAMEF18Q5VWM3 479 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 PI4KAP1Q8N8J0 262 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 MTMR14Q8NCE2 650 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 CFHR5Q9BXR6 569 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 GREM2Q9H772 168 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 SCAF8Q9UPN6 1271 aaKnown RBP11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 HTTP42858 3142 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 MYO3BQ8WXR4 1341 aa11.05□□□□□ -0.64
COL4A3BP-206ENST00000508809 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 H7C1W4 665 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 TXNRD3Q86VQ6 643 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 ZBED3Q96IU2 234 aaPredicted RBP11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
COL4A3BP-206ENST00000508809 CACNA1FO60840 1977 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 GPR25O00155 361 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 LDLRAD1Q5T700 205 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 TTLL5Q6EMB2 1281 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
COL4A3BP-206ENST00000508809 SPEF2Q9C093 1822 aa11.02□□□□□ -0.64
COL4A3BP-206ENST00000508809 CSF1RP07333 972 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 NF2P35240 595 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 DHX9Q08211 1270 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 CCDC116Q8IYX3 515 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 KCTD15Q96SI1 283 aaPredicted RBP11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 ATP13A2Q9NQ11 1180 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 HDAC9Q9UKV0 1011 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 KIAA0100Q14667 2235 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 ZNF804BA4D1E1 1349 aa11.02□□□□□ -0.65
COL4A3BP-206ENST00000508809 IGHMBP2P38935 993 aaKnown RBP11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 GRM5P41594 1212 aa11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 CASP7P55210 303 aa11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 ARMC9Q7Z3E5 817 aa11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 ANKRD2Q9GZV1 360 aa11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 R3HDMLQ9H3Y0 253 aa11.01□□□□□ -0.65
COL4A3BP-206ENST00000508809 UNCXA6NJT0 531 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 FKTNO75072 461 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 ITGA6P23229 1130 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 KLRK1P26718 216 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 INHBEP58166 350 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 GCKRQ14397 625 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 MAP3K11Q16584 847 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 CCDC27Q2M243 656 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
COL4A3BP-206ENST00000508809 C15orf52Q6ZUT6 534 aaKnown RBP11□□□□□ -0.65
COL4A3BP-206ENST00000508809 G2E3Q7L622 706 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 IRS2Q9Y4H2 1338 aa11□□□□□ -0.65
COL4A3BP-206ENST00000508809 SASH1O94885 1247 aa10.99□□□□□ -0.65
COL4A3BP-206ENST00000508809 ZIC2O95409 532 aaPredicted RBP10.99□□□□□ -0.65
COL4A3BP-206ENST00000508809 TIMP2P16035 220 aa10.99□□□□□ -0.65
COL4A3BP-206ENST00000508809 MCCD1P59942 119 aaPredicted RBP10.99□□□□□ -0.65
COL4A3BP-206ENST00000508809 GTF2IP78347 998 aa10.99□□□□□ -0.65
COL4A3BP-206ENST00000508809 KIAA0825Q8IV33 1275 aa10.99□□□□□ -0.65
COL4A3BP-206ENST00000508809 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms