RNA–Protein interactions for RNA: ENST00000508383.1

SLF1-208, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-208ENST00000508383 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
SLF1-208ENST00000508383 USP40Q9NVE5 1235 aa9.15□□□□□ -0.94
SLF1-208ENST00000508383 GNL3LQ9NVN8 582 aaKnown RBP9.15□□□□□ -0.94
SLF1-208ENST00000508383 PLXNB2O15031 1838 aa9.15□□□□□ -0.95
SLF1-208ENST00000508383 GAKO14976 1311 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 SEMA3EO15041 775 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 BCRP11274 1271 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 CCL5P13501 91 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 RGS3P49796 1198 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 PRKCZQ05513 592 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 GPAT2Q6NUI2 795 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 SCYL3Q8IZE3 742 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 IDI2Q9BXS1 227 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 CEP126Q9P2H0 1117 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 DENND2AQ9ULE3 1009 aa9.14□□□□□ -0.95
SLF1-208ENST00000508383 A0A0G2JLL6 359 aaPredicted RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 PHF20L1A8MW92 1017 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 CXCL11O14625 94 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 ENTPD3O75355 529 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 GJB1P08034 283 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 SLURP2P0DP57 97 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 ADORA1P30542 326 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 GJA8P48165 433 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 FCGRTP55899 365 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 SLFN5Q08AF3 891 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 RASGRF1Q13972 1273 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 CCDC102BQ68D86 513 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 GADL1Q6ZQY3 521 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 PRRT2Q7Z6L0 340 aaPredicted RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 ZGPATQ8N5A5 531 aaKnown RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 DPF3Q92784 378 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 RNF208Q9H0X6 261 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 PICK1Q9NRD5 415 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 BIN2Q9UBW5 565 aaPredicted RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 GABRQQ9UN88 632 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 PA2G4Q9UQ80 394 aaKnown RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 LRRFIP2Q9Y608 721 aaKnown RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 ZHX2Q9Y6X8 837 aa9.13□□□□□ -0.95
SLF1-208ENST00000508383 DDX60LQ5H9U9 1706 aaKnown RBP9.13□□□□□ -0.95
SLF1-208ENST00000508383 PDS5AQ29RF7 1337 aaKnown RBP9.12□□□□□ -0.95
SLF1-208ENST00000508383 DDTLA6NHG4 134 aaPredicted RBP9.12□□□□□ -0.95
SLF1-208ENST00000508383 PTPRAP18433 802 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 IL15P40933 162 aaPredicted RBP9.12□□□□□ -0.95
SLF1-208ENST00000508383 BTDP43251 543 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 UBXN2AP68543 259 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 PICALMQ13492 652 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 FASTKD5Q7L8L6 764 aaKnown RBP9.12□□□□□ -0.95
SLF1-208ENST00000508383 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 DDX4Q9NQI0 724 aaKnown RBP9.12□□□□□ -0.95
SLF1-208ENST00000508383 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
SLF1-208ENST00000508383 ABCF2Q9UG63 623 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 AFG3L2Q9Y4W6 797 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 FRMPD3Q5JV73 1810 aa9.12□□□□□ -0.95
SLF1-208ENST00000508383 MYH1P12882 1939 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 MROH7-TTC4A0A0A0MT08 1334 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 ADCY3O60266 1144 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 ELNP15502 786 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
SLF1-208ENST00000508383 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 CCDC84Q86UT8 332 aaPredicted RBP9.11□□□□□ -0.95
SLF1-208ENST00000508383 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 U2AF1L4Q8WU68 220 aaKnown RBP9.11□□□□□ -0.95
SLF1-208ENST00000508383 MEIS3Q99687 375 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 HTATIP2Q9BUP3 242 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 UNC93B1Q9H1C4 597 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
SLF1-208ENST00000508383 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
SLF1-208ENST00000508383 SLC45A1Q9Y2W3 748 aa9.11□□□□□ -0.95
SLF1-208ENST00000508383 COL2A1P02458 1487 aaPredicted RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 A0A1B0GUL7 405 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 FAM196BA6NMK8 535 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 TNPO2O14787 897 aaKnown RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 CTNND1O60716 968 aaKnown RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 FARP2O94887 1054 aaPredicted RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 INHAP05111 366 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 FLT3LGP49771 235 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 TIMM10P62072 90 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 SPTY2D1Q68D10 685 aaPredicted RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 SMCR8Q8TEV9 937 aaPredicted RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 ZNF384Q8TF68 577 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 API5Q9BZZ5 524 aaKnown RBP9.1□□□□□ -0.95
SLF1-208ENST00000508383 AGTPBP1Q9UPW5 1226 aa9.1□□□□□ -0.95
SLF1-208ENST00000508383 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 UNC80Q8N2C7 3258 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 SGPL1O95470 568 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 CT47B1P0C2W7 299 aaPredicted RBP9.09□□□□□ -0.95
SLF1-208ENST00000508383 RHBDL3P58872 404 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 MECOMQ03112 1051 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 TFCP2Q12800 502 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 IRF5Q13568 498 aa9.09□□□□□ -0.95
SLF1-208ENST00000508383 MVPQ14764 893 aaKnown RBP9.09□□□□□ -0.95
SLF1-208ENST00000508383 TREML2Q5T2D2 321 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms