RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
HTT-204ENST00000508321 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
HTT-204ENST00000508321 TRAF5O00463 557 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
HTT-204ENST00000508321 NBPF12Q5TAG4 269 aaPredicted RBP12.21□□□□□ -0.45
HTT-204ENST00000508321 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 CTR9Q6PD62 1173 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 SH3BP5LQ7L8J4 393 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 CRACR2BQ8N4Y2 399 aaPredicted RBP12.21□□□□□ -0.45
HTT-204ENST00000508321 IL25Q9H293 177 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 GBA2Q9HCG7 927 aaPredicted RBP12.21□□□□□ -0.45
HTT-204ENST00000508321 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 SAP30BPQ9UHR5 308 aaKnown RBP12.21□□□□□ -0.45
HTT-204ENST00000508321 PALD1Q9ULE6 856 aa12.21□□□□□ -0.45
HTT-204ENST00000508321 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.46
HTT-204ENST00000508321 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 USP17L21D6R901 530 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 GABPAQ06546 454 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 PPARAQ07869 468 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 IMMTQ16891 758 aaKnown RBP12.2□□□□□ -0.46
HTT-204ENST00000508321 ZFPM1Q8IX07 1006 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 C2orf69Q8N8R5 385 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 RNF41Q9H4P4 317 aaPredicted RBP12.2□□□□□ -0.46
HTT-204ENST00000508321 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
HTT-204ENST00000508321 TMEM88BA6NKF7 163 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 FGAP02671 866 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 PDE4BQ07343 736 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
HTT-204ENST00000508321 RNF20Q5VTR2 975 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
HTT-204ENST00000508321 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 HHIPL1Q96JK4 782 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
HTT-204ENST00000508321 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
HTT-204ENST00000508321 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 ZNF112Q9UJU3 913 aa12.19□□□□□ -0.46
HTT-204ENST00000508321 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
HTT-204ENST00000508321 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 PLCD1P51178 756 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
HTT-204ENST00000508321 TATDN1Q6P1N9 297 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 KLRG1Q96E93 195 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 WRNIP1Q96S55 665 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 CSADQ9Y600 493 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
HTT-204ENST00000508321 PHIPQ8WWQ0 1821 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 ZNF213O14771 459 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
HTT-204ENST00000508321 C8orf34Q49A92 452 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 PRAMEF18Q5VWM3 479 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 DNAJC18Q9H819 358 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 CNNM2Q9H8M5 875 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 ANGEL1Q9UNK9 670 aaKnown RBP12.17□□□□□ -0.46
HTT-204ENST00000508321 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
HTT-204ENST00000508321 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
HTT-204ENST00000508321 PTPRFP10586 1907 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 PHF20L1A8MW92 1017 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 ORC4O43929 436 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 ASNSP08243 561 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 FGRP09769 529 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 CYP2D6P10635 497 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 MCCP23508 829 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 SHMT1P34896 483 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 PTH1RQ03431 593 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 AKNAD1Q5T1N1 836 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 CST9Q5W186 159 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 SCYL3Q8IZE3 742 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
HTT-204ENST00000508321 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 USP2O75604 605 aaPredicted RBP12.15□□□□□ -0.46
HTT-204ENST00000508321 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
HTT-204ENST00000508321 CAP2P40123 477 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 CDK8P49336 464 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 HUNKP57058 714 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 CERKLQ49MI3 558 aaPredicted RBP12.15□□□□□ -0.46
HTT-204ENST00000508321 LDLRAD1Q5T700 205 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 MFSD6Q6ZSS7 791 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 SAPCD2Q86UD0 394 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 KRT23Q9C075 422 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 MKNK2Q9HBH9 465 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 PICK1Q9NRD5 415 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
HTT-204ENST00000508321 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.46
HTT-204ENST00000508321 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 CYP21A2P08686 494 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms