RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DYNLL1P63167 89 aaKnown RBP24.05■■□□□ 1.44
SFXN1-209ENST00000508290 PTPN18Q99952 460 aa24.05■■□□□ 1.44
SFXN1-209ENST00000508290 ZNF532Q9HCE3 1301 aa24.05■■□□□ 1.44
SFXN1-209ENST00000508290 FKTNO75072 461 aa24.04■■□□□ 1.44
SFXN1-209ENST00000508290 PTPRAP18433 802 aa24.04■■□□□ 1.44
SFXN1-209ENST00000508290 UBE3CQ15386 1083 aa24.04■■□□□ 1.44
SFXN1-209ENST00000508290 PKN2Q16513 984 aaKnown RBP24.04■■□□□ 1.44
SFXN1-209ENST00000508290 LRRFIP1Q32MZ4 808 aaKnown RBP24.04■■□□□ 1.44
SFXN1-209ENST00000508290 CTU1Q7Z7A3 348 aaKnown RBP24.04■■□□□ 1.44
SFXN1-209ENST00000508290 TTC6Q86TZ1 520 aa24.04■■□□□ 1.44
SFXN1-209ENST00000508290 ZNF296Q8WUU4 475 aaPredicted RBP24.04■■□□□ 1.44
SFXN1-209ENST00000508290 ZFYVE28Q9HCC9 887 aa24.04■■□□□ 1.44
SFXN1-209ENST00000508290 TCRBV5S4A2TA0A5A2 114 aa24.03■■□□□ 1.44
SFXN1-209ENST00000508290 ADD2P35612 726 aa24.03■■□□□ 1.44
SFXN1-209ENST00000508290 CRACR2BQ8N4Y2 399 aaPredicted RBP24.03■■□□□ 1.44
SFXN1-209ENST00000508290 EHD4Q9H223 541 aa24.03■■□□□ 1.44
SFXN1-209ENST00000508290 CAP2P40123 477 aa24.02■■□□□ 1.44
SFXN1-209ENST00000508290 CRHR2Q13324 411 aa24.02■■□□□ 1.44
SFXN1-209ENST00000508290 DGKZQ13574 1117 aa24.02■■□□□ 1.44
SFXN1-209ENST00000508290 TAF1CQ15572 869 aaPredicted RBP24.02■■□□□ 1.44
SFXN1-209ENST00000508290 FASTKD5Q7L8L6 764 aaKnown RBP24.02■■□□□ 1.44
SFXN1-209ENST00000508290 ANKRD23Q86SG2 305 aa24.02■■□□□ 1.44
SFXN1-209ENST00000508290 RWDD1Q9H446 243 aaPredicted RBP24.02■■□□□ 1.44
SFXN1-209ENST00000508290 ZHX2Q9Y6X8 837 aa24.02■■□□□ 1.44
SFXN1-209ENST00000508290 FOCADQ5VW36 1801 aa24.02■■□□□ 1.44
SFXN1-209ENST00000508290 MYO5AQ9Y4I1 1855 aaKnown RBP24.01■■□□□ 1.43
SFXN1-209ENST00000508290 GLRX3O76003 335 aaKnown RBP24.01■■□□□ 1.43
SFXN1-209ENST00000508290 PALD1Q9ULE6 856 aa24.01■■□□□ 1.43
SFXN1-209ENST00000508290 ZFYP08048 801 aaPredicted RBP24■■□□□ 1.43
SFXN1-209ENST00000508290 ASNSP08243 561 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 FAM43AQ8N2R8 423 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 KBTBD3Q8NAB2 608 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 EDC3Q96F86 508 aaKnown RBP24■■□□□ 1.43
SFXN1-209ENST00000508290 ERO1AQ96HE7 468 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 MCOLN1Q9GZU1 580 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 AS3MTQ9HBK9 375 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 AFG3L2Q9Y4W6 797 aa24■■□□□ 1.43
SFXN1-209ENST00000508290 DOCK1Q14185 1865 aa23.99■■□□□ 1.43
SFXN1-209ENST00000508290 A0A0G2JLL6 359 aaPredicted RBP23.99■■□□□ 1.43
SFXN1-209ENST00000508290 BTBD19C9JJ37 291 aa23.99■■□□□ 1.43
SFXN1-209ENST00000508290 ARHGEF6Q15052 776 aa23.99■■□□□ 1.43
SFXN1-209ENST00000508290 PRRT2Q7Z6L0 340 aaPredicted RBP23.99■■□□□ 1.43
SFXN1-209ENST00000508290 ABHD8Q96I13 439 aa23.99■■□□□ 1.43
SFXN1-209ENST00000508290 SERPINB13Q9UIV8 391 aa23.99■■□□□ 1.43
SFXN1-209ENST00000508290 MX1P20591 662 aa23.98■■□□□ 1.43
SFXN1-209ENST00000508290 DDRGK1Q96HY6 314 aa23.98■■□□□ 1.43
SFXN1-209ENST00000508290 ATP8A2Q9NTI2 1148 aa23.98■■□□□ 1.43
SFXN1-209ENST00000508290 SAP30BPQ9UHR5 308 aaKnown RBP23.98■■□□□ 1.43
SFXN1-209ENST00000508290 SLC45A1Q9Y2W3 748 aa23.98■■□□□ 1.43
SFXN1-209ENST00000508290 SUPT16HQ9Y5B9 1047 aaKnown RBP23.98■■□□□ 1.43
SFXN1-209ENST00000508290 CASP8AP2Q9UKL3 1982 aa23.98■■□□□ 1.43
SFXN1-209ENST00000508290 FAM196BA6NMK8 535 aa23.97■■□□□ 1.43
SFXN1-209ENST00000508290 USP17L5A8MUK1 530 aa23.97■■□□□ 1.43
SFXN1-209ENST00000508290 ANKRD45Q5TZF3 282 aa23.97■■□□□ 1.43
SFXN1-209ENST00000508290 TLR2O60603 784 aa23.96■■□□□ 1.43
SFXN1-209ENST00000508290 SP3Q02447 781 aa23.96■■□□□ 1.43
SFXN1-209ENST00000508290 AMOTL1Q8IY63 956 aa23.96■■□□□ 1.43
SFXN1-209ENST00000508290 ZNF280CQ8ND82 737 aa23.96■■□□□ 1.43
SFXN1-209ENST00000508290 R3HDMLQ9H3Y0 253 aa23.96■■□□□ 1.43
SFXN1-209ENST00000508290 CDK5RAP2Q96SN8 1893 aa23.96■■□□□ 1.43
SFXN1-209ENST00000508290 PDHXO00330 501 aa23.95■■□□□ 1.42
SFXN1-209ENST00000508290 POLR3DP05423 398 aaPredicted RBP23.95■■□□□ 1.42
SFXN1-209ENST00000508290 SMC5Q8IY18 1101 aa23.95■■□□□ 1.42
SFXN1-209ENST00000508290 LCORLQ8N3X6 602 aa23.95■■□□□ 1.42
SFXN1-209ENST00000508290 PARK7Q99497 189 aaKnown RBP23.95■■□□□ 1.42
SFXN1-209ENST00000508290 DNAJC18Q9H819 358 aa23.95■■□□□ 1.42
SFXN1-209ENST00000508290 MBD4O95243 580 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 MOGSQ13724 837 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 TATDN1Q6P1N9 297 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 TICAM2Q86XR7 235 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 PROCA1Q8NCQ7 364 aaPredicted RBP23.94■■□□□ 1.42
SFXN1-209ENST00000508290 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 PI4K2BQ8TCG2 481 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 WDR18Q9BV38 432 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 DCP1AQ9NPI6 582 aaPredicted RBP23.94■■□□□ 1.42
SFXN1-209ENST00000508290 MCM9Q9NXL9 1143 aa23.94■■□□□ 1.42
SFXN1-209ENST00000508290 SALL3Q9BXA9 1300 aa23.93■■□□□ 1.42
SFXN1-209ENST00000508290 TRIM75PA6NK02 468 aa23.93■■□□□ 1.42
SFXN1-209ENST00000508290 SLURP2P0DP57 97 aa23.93■■□□□ 1.42
SFXN1-209ENST00000508290 APPBP2Q92624 585 aa23.93■■□□□ 1.42
SFXN1-209ENST00000508290 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
SFXN1-209ENST00000508290 STAP2Q9UGK3 403 aa23.93■■□□□ 1.42
SFXN1-209ENST00000508290 SIPA1L1O43166 1804 aa23.92■■□□□ 1.42
SFXN1-209ENST00000508290 RNF113AO15541 343 aaKnown RBP23.92■■□□□ 1.42
SFXN1-209ENST00000508290 PABPC4Q13310 644 aaKnown RBP eCLIP23.92■■□□□ 1.42
SFXN1-209ENST00000508290 FBXO46Q6PJ61 603 aaPredicted RBP23.92■■□□□ 1.42
SFXN1-209ENST00000508290 SWAP70Q9UH65 585 aa23.92■■□□□ 1.42
SFXN1-209ENST00000508290 PNMA3Q9UL41 463 aa23.92■■□□□ 1.42
SFXN1-209ENST00000508290 ZBTB21Q9ULJ3 1066 aa23.92■■□□□ 1.42
SFXN1-209ENST00000508290 DDX60LQ5H9U9 1706 aaKnown RBP23.91■■□□□ 1.42
SFXN1-209ENST00000508290 SPP2Q13103 211 aa23.91■■□□□ 1.42
SFXN1-209ENST00000508290 KIF22Q14807 665 aa23.91■■□□□ 1.42
SFXN1-209ENST00000508290 SH3D19Q5HYK7 790 aa23.91■■□□□ 1.42
SFXN1-209ENST00000508290 TSHZ3Q63HK5 1081 aa23.91■■□□□ 1.42
SFXN1-209ENST00000508290 SDR42E1Q8WUS8 393 aa23.91■■□□□ 1.42
SFXN1-209ENST00000508290 AGTPBP1Q9UPW5 1226 aa23.91■■□□□ 1.42
SFXN1-209ENST00000508290 C19orf81C9J6K1 198 aa23.9■■□□□ 1.42
SFXN1-209ENST00000508290 GNRH1P01148 92 aa23.9■■□□□ 1.42
SFXN1-209ENST00000508290 GNAT2P19087 354 aa23.9■■□□□ 1.42
SFXN1-209ENST00000508290 RRP1BQ14684 758 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms