RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	LBX1	P52954	281 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	DYNLL1	P63167	89 aa	Known RBP	6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	ZSCAN25	Q6NSZ9	544 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	SH3BP5L	Q7L8J4	393 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	ERO1B	Q86YB8	467 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	MAPKAPK5	Q8IW41	473 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	MIGA1	Q8NAN2	632 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	EDC3	Q96F86	508 aa	Known RBP	6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	PRDM10	Q9NQV6	1147 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	SAGE1	Q9NXZ1	904 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	PI4KB	Q9UBF8	816 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	ZNF112	Q9UJU3	913 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692		A0A0G2JMZ2	1700 aa		6.08	□□□□□ -1.44
SNHG4-205	ENST00000507692	KIAA1217	Q5T5P2	1943 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	TCRBV5S4A2T	A0A5A2	114 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	SPDYE5	A6NIY4	337 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	TRPA1	O75762	1119 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	GLRX3	O76003	335 aa	Known RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	ALDH1A1	P00352	501 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	HLA-DOA	P06340	250 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	MX1	P20591	662 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	INPP5B	P32019	993 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	GJA5	P36382	358 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	GTF2A2	P52657	109 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	IRX6	P78412	446 aa	Predicted RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	MAP3K10	Q02779	954 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	PPAT	Q06203	517 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	PPIL2	Q13356	520 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	NOL9	Q5SY16	702 aa	Known RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	TSHZ3	Q63HK5	1081 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	OTUD7B	Q6GQQ9	843 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	SMC5	Q8IY18	1101 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	KBTBD3	Q8NAB2	608 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	OTUD5	Q96G74	571 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	RIOK1	Q9BRS2	568 aa	Known RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	TRIM34	Q9BYJ4	488 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	CRNKL1	Q9BZJ0	848 aa	Known RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	RNF186	Q9NXI6	227 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	HERC5	Q9UII4	1024 aa	Known RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	TSKS	Q9UJT2	592 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	SNCAIP	Q9Y6H5	919 aa		6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	TNRC18	O15417	2968 aa	Predicted RBP	6.07	□□□□□ -1.44
SNHG4-205	ENST00000507692	SALL3	Q9BXA9	1300 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	TESPA1	A2RU30	521 aa	Predicted RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	FAM196B	A6NMK8	535 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	PHF20L1	A8MW92	1017 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	IRF6	O14896	467 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	CTNND1	O60716	968 aa	Known RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	IGHD	P01880	384 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	MYCN	P04198	464 aa	Predicted RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	ZFY	P08048	801 aa	Predicted RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	SNAPC2	Q13487	334 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	UBE3C	Q15386	1083 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	B4GALNT3	Q6L9W6	998 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	CHRDL2	Q6WN34	429 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	TTC6	Q86TZ1	520 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	IFNL1	Q8IU54	200 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	SCYL3	Q8IZE3	742 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	LCORL	Q8N3X6	602 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	PI4K2B	Q8TCG2	481 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	OTUD7A	Q8TE49	926 aa	Predicted RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	LNPK	Q9C0E8	428 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	PICK1	Q9NRD5	415 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	SAP30BP	Q9UHR5	308 aa	Known RBP	6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	PALD1	Q9ULE6	856 aa		6.06	□□□□□ -1.44
SNHG4-205	ENST00000507692	WDR81	Q562E7	1941 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	BRCA2	P51587	3418 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	KAT6A	Q92794	2004 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	CCL15-CCL14	A0A0B4J2E2	113 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	RNF113A	O15541	343 aa	Known RBP	6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	MBD4	O95243	580 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	TBC1D8	O95759	1140 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	POLR3D	P05423	398 aa	Predicted RBP	6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	SLURP2	P0DP57	97 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	CETP	P11597	493 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	CAP2	P40123	477 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	PDE1A	P54750	535 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	NUCB1	Q02818	461 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	CCL15	Q16663	113 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	SLC4A8	Q2Y0W8	1093 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	SLFNL1	Q499Z3	407 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	METTL16	Q86W50	562 aa	Known RBP	6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	CHD1L	Q86WJ1	897 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	AMOTL1	Q8IY63	956 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	SDR42E1	Q8WUS8	393 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	DDRGK1	Q96HY6	314 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	MS4A4A	Q96JQ5	239 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	FSD1	Q9BTV5	496 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	CFHR5	Q9BXR6	569 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	TBC1D2	Q9BYX2	928 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	EHD4	Q9H223	541 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	ARMT1	Q9H993	441 aa		6.05	□□□□□ -1.44
SNHG4-205	ENST00000507692	ZCCHC17	Q9NP64	241 aa	Known RBP	6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms