RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 EHMT1Q9H9B1 1298 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 ZNF408Q9H9D4 720 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 SUGCTQ9HAC7 445 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 CRIM1Q9NZV1 1036 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 ZNRF3Q9ULT6 936 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 PCDHB14Q9Y5E9 798 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 SNCAIPQ9Y6H5 919 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 PRR36Q9H6K5 1346 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 DNAJA2O60884 412 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 ATE1O95260 518 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 TIAF1O95411 115 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 APBA3O96018 575 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 ADH5P11766 374 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 DRD2P14416 443 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 MCM4P33991 863 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.54
LSM6-205ENST00000507449 ETFBP38117 255 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 ID3Q02535 119 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 RBL2Q08999 1139 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 PPM1JQ5JR12 505 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 FAM169BQ8N8A8 192 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 SMG8Q8ND04 991 aaKnown RBP5.43□□□□□ -1.54
LSM6-205ENST00000507449 FMNL2Q96PY5 1086 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 DNAJC2Q99543 621 aaKnown RBP5.43□□□□□ -1.54
LSM6-205ENST00000507449 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 RNF208Q9H0X6 261 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 ANTXR1Q9H6X2 564 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 DISC1Q9NRI5 854 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 HIF3AQ9Y2N7 669 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 MRVI1Q9Y6F6 885 aa5.43□□□□□ -1.54
LSM6-205ENST00000507449 COL17A1Q9UMD9 1497 aaPredicted RBP5.43□□□□□ -1.54
LSM6-205ENST00000507449 LOC105371045A0A1W2PR82 267 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 PRAMEF27A3QJZ7 478 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 HTR3BO95264 441 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 NEFMP07197 916 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 GIPRP48546 466 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 ZNF165P49910 485 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 ERVK-24P63145 666 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 PRRT3Q5FWE3 981 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 AKAP4Q5JQC9 854 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 HP1BP3Q5SSJ5 553 aaPredicted RBP5.42□□□□□ -1.54
LSM6-205ENST00000507449 Q6ZS46 218 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 HDXQ7Z353 690 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 UBE3DQ7Z6J8 389 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 TMEM130Q8N3G9 435 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 ELMO3Q96BJ8 720 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 LENG1Q96BZ8 264 aaPredicted RBP5.42□□□□□ -1.54
LSM6-205ENST00000507449 FANCD2OSQ96PS1 177 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 SRRTQ9BXP5 876 aaKnown RBP5.42□□□□□ -1.54
LSM6-205ENST00000507449 GSX1Q9H4S2 264 aaPredicted RBP5.42□□□□□ -1.54
LSM6-205ENST00000507449 RAD18Q9NS91 495 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 STRIP2Q9ULQ0 834 aa5.42□□□□□ -1.54
LSM6-205ENST00000507449 SSBP05455 408 aaKnown RBP eCLIP5.41□□□□□ -1.54
LSM6-205ENST00000507449 SLFN14P0C7P3 912 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 NOS3P29474 1203 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 GRK4P32298 578 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 SOX4Q06945 474 aaPredicted RBP5.41□□□□□ -1.54
LSM6-205ENST00000507449 ZBTB37Q5TC79 503 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 NUTM2GQ5VZR2 741 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 LSRQ86X29 649 aaPredicted RBP5.41□□□□□ -1.54
LSM6-205ENST00000507449 C2CD4AQ8NCU7 369 aaPredicted RBP5.41□□□□□ -1.54
LSM6-205ENST00000507449 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 REV1Q9UBZ9 1251 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 AP4E1Q9UPM8 1137 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 TACC3Q9Y6A5 838 aa5.41□□□□□ -1.54
LSM6-205ENST00000507449 MEIS3P2A8K0S8 358 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 PREPP48147 710 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 RBBP8NLQ8NC74 664 aaPredicted RBP5.4□□□□□ -1.54
LSM6-205ENST00000507449 ANAPC16Q96DE5 110 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 NACC1Q96RE7 527 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 LNPKQ9C0E8 428 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 WNT10AQ9GZT5 417 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 FBRSQ9HAH7 460 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 CYP4F12Q9HCS2 524 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 ACTL7BQ9Y614 415 aa5.4□□□□□ -1.54
LSM6-205ENST00000507449 KLF4O43474 513 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 STK10O94804 968 aaKnown RBP5.39□□□□□ -1.55
LSM6-205ENST00000507449 PLCG1P19174 1290 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 EIF6P56537 245 aaKnown RBP5.39□□□□□ -1.55
LSM6-205ENST00000507449 TTLL4Q14679 1199 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 MBTPS1Q14703 1052 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 TMEM201Q5SNT2 666 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 FBXW10Q5XX13 1052 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 C12orf50Q8NA57 414 aaPredicted RBP5.39□□□□□ -1.55
LSM6-205ENST00000507449 RNF214Q8ND24 703 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 CPLX3Q8WVH0 158 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 ACSF2Q96CM8 615 aaPredicted RBP5.39□□□□□ -1.55
LSM6-205ENST00000507449 UBL7Q96S82 380 aaPredicted RBP5.39□□□□□ -1.55
LSM6-205ENST00000507449 AKTIPQ9H8T0 292 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 TPSG1Q9NRR2 321 aa5.39□□□□□ -1.55
LSM6-205ENST00000507449 SLC22A31A6NKX4 558 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
LSM6-205ENST00000507449 FANCGO15287 622 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 PGRP06401 933 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 HCLS1P14317 486 aaPredicted RBP5.38□□□□□ -1.55
LSM6-205ENST00000507449 IREB2P48200 963 aaKnown RBP5.38□□□□□ -1.55
LSM6-205ENST00000507449 HNRNPUQ00839 825 aaKnown RBP eCLIP5.38□□□□□ -1.55
LSM6-205ENST00000507449 SERINC3Q13530 473 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms