RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
COPS4-205ENST00000507376 BMP8BP34820 402 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 HDLBPQ00341 1268 aaKnown RBP11.26□□□□□ -0.61
COPS4-205ENST00000507376 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 VPS37DQ86XT2 251 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
COPS4-205ENST00000507376 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
COPS4-205ENST00000507376 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
COPS4-205ENST00000507376 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
COPS4-205ENST00000507376 RPTORQ8N122 1335 aa11.26□□□□□ -0.61
COPS4-205ENST00000507376 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
COPS4-205ENST00000507376 RGS3P49796 1198 aa11.25□□□□□ -0.61
COPS4-205ENST00000507376 IRF5Q13568 498 aa11.25□□□□□ -0.61
COPS4-205ENST00000507376 RRP1BQ14684 758 aaKnown RBP11.25□□□□□ -0.61
COPS4-205ENST00000507376 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
COPS4-205ENST00000507376 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
COPS4-205ENST00000507376 HHIPL2Q6UWX4 724 aa11.25□□□□□ -0.61
COPS4-205ENST00000507376 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
COPS4-205ENST00000507376 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
COPS4-205ENST00000507376 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
COPS4-205ENST00000507376 AFG3L2Q9Y4W6 797 aa11.25□□□□□ -0.61
COPS4-205ENST00000507376 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
COPS4-205ENST00000507376 FGFR2P21802 821 aa11.24□□□□□ -0.61
COPS4-205ENST00000507376 TBC1D22AQ8WUA7 517 aa11.24□□□□□ -0.61
COPS4-205ENST00000507376 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
COPS4-205ENST00000507376 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
COPS4-205ENST00000507376 CXCL11O14625 94 aa11.23□□□□□ -0.61
COPS4-205ENST00000507376 HMGCRP04035 888 aa11.23□□□□□ -0.61
COPS4-205ENST00000507376 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
COPS4-205ENST00000507376 C9orf78Q9NZ63 289 aaPredicted RBP11.23□□□□□ -0.61
COPS4-205ENST00000507376 GJD2Q9UKL4 321 aa11.23□□□□□ -0.61
COPS4-205ENST00000507376 DNAH12Q6ZR08 3092 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 MAST3O60307 1309 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 PDE8BO95263 885 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 CYP2B6P20813 491 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 MUC3AQ02505 3323 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 PICALMQ13492 652 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 CCL14Q16627 93 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
COPS4-205ENST00000507376 GPR153Q6NV75 609 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
COPS4-205ENST00000507376 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 COL6A1P12109 1028 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
COPS4-205ENST00000507376 ADORA1P30542 326 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 PHKA1P46020 1223 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 HMGCS2P54868 508 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 JAG1P78504 1218 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 POTEEQ6S8J3 1075 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 TXNRD2Q9NNW7 524 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 PICK1Q9NRD5 415 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
COPS4-205ENST00000507376 RFX5P48382 616 aaPredicted RBP11.2□□□□□ -0.62
COPS4-205ENST00000507376 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
COPS4-205ENST00000507376 MAP3K21Q5TCX8 1036 aa11.2□□□□□ -0.62
COPS4-205ENST00000507376 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
COPS4-205ENST00000507376 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
COPS4-205ENST00000507376 COA7Q96BR5 231 aa11.2□□□□□ -0.62
COPS4-205ENST00000507376 SRCIN1Q9C0H9 1055 aa11.2□□□□□ -0.62
COPS4-205ENST00000507376 RLFQ13129 1914 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 UTYO14607 1347 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 ALDH1L1O75891 902 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 C9orf50Q5SZB4 431 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 FASTKD5Q7L8L6 764 aaKnown RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 USP38Q8NB14 1042 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 MYLIPQ8WY64 445 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 SIL1Q9H173 461 aa11.19□□□□□ -0.62
COPS4-205ENST00000507376 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 TTYH1Q9H313 450 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
COPS4-205ENST00000507376 GAKO14976 1311 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 IL16Q14005 1332 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 CACNB2Q08289 660 aaPredicted RBP11.18□□□□□ -0.62
COPS4-205ENST00000507376 SPP2Q13103 211 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 PI16Q6UXB8 463 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 MAFAQ8NHW3 353 aaPredicted RBP11.18□□□□□ -0.62
COPS4-205ENST00000507376 PORCNQ9H237 461 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
COPS4-205ENST00000507376 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
COPS4-205ENST00000507376 NDUFB9Q9Y6M9 179 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms