RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ZSCAN29Q8IWY8 852 aaPredicted RBP20.45■□□□□ 0.86
SNF8-205ENST00000507302 SIPA1L1O43166 1804 aa20.45■□□□□ 0.86
SNF8-205ENST00000507302 RPTORQ8N122 1335 aa20.45■□□□□ 0.86
SNF8-205ENST00000507302 BTDP43251 543 aa20.44■□□□□ 0.86
SNF8-205ENST00000507302 MAP3K21Q5TCX8 1036 aa20.44■□□□□ 0.86
SNF8-205ENST00000507302 CCDC84Q86UT8 332 aaPredicted RBP20.44■□□□□ 0.86
SNF8-205ENST00000507302 MORF4L1Q9UBU8 362 aa20.44■□□□□ 0.86
SNF8-205ENST00000507302 ANP32CO43423 234 aa20.43■□□□□ 0.86
SNF8-205ENST00000507302 SPTY2D1Q68D10 685 aaPredicted RBP20.43■□□□□ 0.86
SNF8-205ENST00000507302 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
SNF8-205ENST00000507302 ZNF280CQ8ND82 737 aa20.43■□□□□ 0.86
SNF8-205ENST00000507302 OGDHLQ9ULD0 1010 aa20.43■□□□□ 0.86
SNF8-205ENST00000507302 UNC80Q8N2C7 3258 aa20.42■□□□□ 0.86
SNF8-205ENST00000507302 E9PSI1 815 aa20.42■□□□□ 0.86
SNF8-205ENST00000507302 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
SNF8-205ENST00000507302 MECOMQ03112 1051 aa20.42■□□□□ 0.86
SNF8-205ENST00000507302 NBPF3Q9H094 633 aa20.42■□□□□ 0.86
SNF8-205ENST00000507302 HMX1Q9NP08 348 aaPredicted RBP20.42■□□□□ 0.86
SNF8-205ENST00000507302 PA2G4Q9UQ80 394 aaKnown RBP20.42■□□□□ 0.86
SNF8-205ENST00000507302 CAP2P40123 477 aa20.41■□□□□ 0.86
SNF8-205ENST00000507302 TRIM32Q13049 653 aa20.41■□□□□ 0.86
SNF8-205ENST00000507302 SPP2Q13103 211 aa20.41■□□□□ 0.86
SNF8-205ENST00000507302 PICALMQ13492 652 aa20.41■□□□□ 0.86
SNF8-205ENST00000507302 RRP1BQ14684 758 aaKnown RBP20.41■□□□□ 0.86
SNF8-205ENST00000507302 ASCC2Q9H1I8 757 aaPredicted RBP20.41■□□□□ 0.86
SNF8-205ENST00000507302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
SNF8-205ENST00000507302 ABCF2Q9UG63 623 aa20.41■□□□□ 0.86
SNF8-205ENST00000507302 TIMM10P62072 90 aa20.4■□□□□ 0.86
SNF8-205ENST00000507302 SLFN5Q08AF3 891 aa20.4■□□□□ 0.86
SNF8-205ENST00000507302 PABPC4Q13310 644 aaKnown RBP eCLIP20.4■□□□□ 0.862e-8■■■□□ 14.6
SNF8-205ENST00000507302 C7orf61Q8IZ16 206 aa20.4■□□□□ 0.86
SNF8-205ENST00000507302 FAM9BQ8IZU0 186 aa20.4■□□□□ 0.86
SNF8-205ENST00000507302 TRIB2Q92519 343 aa20.4■□□□□ 0.86
SNF8-205ENST00000507302 CDK5RAP2Q96SN8 1893 aa20.39■□□□□ 0.86
SNF8-205ENST00000507302 FOCADQ5VW36 1801 aa20.39■□□□□ 0.86
SNF8-205ENST00000507302 FAM196BA6NMK8 535 aa20.39■□□□□ 0.85
SNF8-205ENST00000507302 COL6A1P12109 1028 aa20.39■□□□□ 0.85
SNF8-205ENST00000507302 XRCC5P13010 732 aaKnown RBP20.39■□□□□ 0.85
SNF8-205ENST00000507302 HOXA7P31268 230 aaPredicted RBP20.39■□□□□ 0.85
SNF8-205ENST00000507302 HMGCS2P54868 508 aa20.39■□□□□ 0.85
SNF8-205ENST00000507302 NSUN4Q96CB9 384 aaKnown RBP20.39■□□□□ 0.85
SNF8-205ENST00000507302 WDR18Q9BV38 432 aa20.39■□□□□ 0.85
SNF8-205ENST00000507302 TAOK2Q9UL54 1235 aa20.39■□□□□ 0.85
SNF8-205ENST00000507302 STXBP5LQ9Y2K9 1186 aa20.39■□□□□ 0.85
SNF8-205ENST00000507302 PFASO15067 1338 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 A0A1B0GUL7 405 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 USP17L5A8MUK1 530 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 TRMT2AQ8IZ69 625 aaKnown RBP20.38■□□□□ 0.85
SNF8-205ENST00000507302 TDHQ8IZJ6 230 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 DEFB123Q8N688 67 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 XAGE2Q96GT9 111 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 C11orf49Q9H6J7 331 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 HERC5Q9UII4 1024 aaKnown RBP20.38■□□□□ 0.85
SNF8-205ENST00000507302 ZMYND8Q9ULU4 1186 aaPredicted RBP20.38■□□□□ 0.85
SNF8-205ENST00000507302 HDAC5Q9UQL6 1122 aa20.38■□□□□ 0.85
SNF8-205ENST00000507302 MAGEA10P43363 369 aaPredicted RBP20.37■□□□□ 0.85
SNF8-205ENST00000507302 MTX1Q13505 466 aa20.37■□□□□ 0.85
SNF8-205ENST00000507302 MVPQ14764 893 aaKnown RBP20.37■□□□□ 0.85
SNF8-205ENST00000507302 METTL16Q86W50 562 aaKnown RBP20.37■□□□□ 0.85
SNF8-205ENST00000507302 USP6NLQ92738 828 aa20.37■□□□□ 0.85
SNF8-205ENST00000507302 MTMR10Q9NXD2 777 aa20.37■□□□□ 0.85
SNF8-205ENST00000507302 HMG20BQ9P0W2 317 aa20.37■□□□□ 0.85
SNF8-205ENST00000507302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.37■□□□□ 0.85
SNF8-205ENST00000507302 FRMPD3Q5JV73 1810 aa20.37■□□□□ 0.85
SNF8-205ENST00000507302 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
SNF8-205ENST00000507302 LAMA2P24043 3122 aaKnown RBP20.36■□□□□ 0.85
SNF8-205ENST00000507302 DNAH12Q6ZR08 3092 aa20.35■□□□□ 0.85
SNF8-205ENST00000507302 LDHCP07864 332 aa20.35■□□□□ 0.85
SNF8-205ENST00000507302 BACE1P56817 501 aa20.35■□□□□ 0.85
SNF8-205ENST00000507302 GSTO1P78417 241 aa20.35■□□□□ 0.85
SNF8-205ENST00000507302 AS3MTQ9HBK9 375 aa20.35■□□□□ 0.85
SNF8-205ENST00000507302 MAST2Q6P0Q8 1798 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 ARID4AP29374 1257 aaPredicted RBP20.34■□□□□ 0.85
SNF8-205ENST00000507302 TFCP2Q12800 502 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 Q7L0L9 218 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 TRMT44Q8IYL2 757 aaKnown RBP20.34■□□□□ 0.85
SNF8-205ENST00000507302 SOCS4Q8WXH5 440 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 MEIS3Q99687 375 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 TXNRD2Q9NNW7 524 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
SNF8-205ENST00000507302 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
SNF8-205ENST00000507302 PRKAR2AP13861 404 aaKnown RBP20.33■□□□□ 0.85
SNF8-205ENST00000507302 SYN1P17600 705 aa20.33■□□□□ 0.85
SNF8-205ENST00000507302 LHX8Q68G74 356 aa20.33■□□□□ 0.85
SNF8-205ENST00000507302 POTEEQ6S8J3 1075 aa20.33■□□□□ 0.85
SNF8-205ENST00000507302 SPATA5Q8NB90 893 aa20.33■□□□□ 0.85
SNF8-205ENST00000507302 P2RX7Q99572 595 aaKnown RBP20.33■□□□□ 0.85
SNF8-205ENST00000507302 PI4KBQ9UBF8 816 aa20.33■□□□□ 0.85
SNF8-205ENST00000507302 RBPJLQ9UBG7 517 aa20.33■□□□□ 0.85
SNF8-205ENST00000507302 JAG1P78504 1218 aa20.32■□□□□ 0.84
SNF8-205ENST00000507302 PI16Q6UXB8 463 aa20.32■□□□□ 0.84
SNF8-205ENST00000507302 NUDT12Q9BQG2 462 aa20.32■□□□□ 0.84
SNF8-205ENST00000507302 DHX36Q9H2U1 1008 aaKnown RBP20.32■□□□□ 0.84
SNF8-205ENST00000507302 DNAJC18Q9H819 358 aa20.32■□□□□ 0.84
SNF8-205ENST00000507302 GINM1Q9NU53 330 aa20.32■□□□□ 0.84
SNF8-205ENST00000507302 C19orf81C9J6K1 198 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 ASNSP08243 561 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 CYP2B6P20813 491 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 HERVK_113P62684 666 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms