RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 UBE2Q2LH0YL09 131 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 TTLL12Q14166 644 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-205ENST00000506963 DEFB115Q30KQ5 88 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 C12orf60Q5U649 245 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 RGMBQ6NW40 437 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 CWC27Q6UX04 472 aaKnown RBP11.65□□□□□ -0.54
SFXN1-205ENST00000506963 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-205ENST00000506963 ZNF589Q86UQ0 364 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-205ENST00000506963 IFNL3Q8IZI9 196 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 DNAJC18Q9H819 358 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 EPB41L4AQ9HCS5 686 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-205ENST00000506963 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
SFXN1-205ENST00000506963 SERPINB13Q9UIV8 391 aa11.65□□□□□ -0.54
SFXN1-205ENST00000506963 ROBO3Q96MS0 1386 aa11.65□□□□□ -0.55
SFXN1-205ENST00000506963 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 USP17L21D6R901 530 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
SFXN1-205ENST00000506963 POLR3DP05423 398 aaPredicted RBP11.64□□□□□ -0.55
SFXN1-205ENST00000506963 PLCD1P51178 756 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 CTR9Q6PD62 1173 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 MIGA2Q7L4E1 593 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 DNAJC5GQ8N7S2 189 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
SFXN1-205ENST00000506963 GINM1Q9NU53 330 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
SFXN1-205ENST00000506963 DOCK1Q14185 1865 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 FAM155AB1AL88 458 aaPredicted RBP11.63□□□□□ -0.55
SFXN1-205ENST00000506963 SGSM2O43147 1006 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 SLC10A3P09131 477 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
SFXN1-205ENST00000506963 ECE1P42892 770 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 HTRA3P83110 453 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 PRKG1Q13976 671 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 VGLL4Q14135 290 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 AMOTL1Q8IY63 956 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 DSCC1Q9BVC3 393 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 IL25Q9H293 177 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 SWAP70Q9UH65 585 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 SNCAIPQ9Y6H5 919 aa11.63□□□□□ -0.55
SFXN1-205ENST00000506963 ZBTB48P10074 688 aaPredicted RBP11.62□□□□□ -0.55
SFXN1-205ENST00000506963 CYP2D6P10635 497 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 INPP5BP32019 993 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 SHMT1P34896 483 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 CAP2P40123 477 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 TDO2P48775 406 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 ZNF157P51786 506 aaPredicted RBP11.62□□□□□ -0.55
SFXN1-205ENST00000506963 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 SCYL3Q8IZE3 742 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 CRACR2BQ8N4Y2 399 aaPredicted RBP11.62□□□□□ -0.55
SFXN1-205ENST00000506963 CLMNQ96JQ2 1002 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 NAPBQ9H115 298 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 CSADQ9Y600 493 aa11.62□□□□□ -0.55
SFXN1-205ENST00000506963 ATAD5Q96QE3 1844 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 MYH8P13535 1937 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 CDC45O75419 566 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 FGAP02671 866 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 APPP05067 770 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 FGRP09769 529 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 MAP2K2P36507 400 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 PPATQ06203 517 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 NOGQ13253 232 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 RRP1BQ14684 758 aaKnown RBP11.61□□□□□ -0.55
SFXN1-205ENST00000506963 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 ERO1BQ86YB8 467 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 ZKSCAN4Q969J2 545 aaPredicted RBP11.61□□□□□ -0.55
SFXN1-205ENST00000506963 SLC10A4Q96EP9 437 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 CAPNS2Q96L46 248 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 ESYT1Q9BSJ8 1104 aa11.61□□□□□ -0.55
SFXN1-205ENST00000506963 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
SFXN1-205ENST00000506963 LAMA4Q16363 1823 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 CYP2D7A0A087X1C5 515 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 FAM196BA6NMK8 535 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 ASNSP08243 561 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 VEGFBP49765 207 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 NT5C2P49902 561 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 EVX2Q03828 476 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 PPARAQ07869 468 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
SFXN1-205ENST00000506963 CYP4F22Q6NT55 531 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 REM2Q8IYK8 340 aaPredicted RBP11.6□□□□□ -0.55
SFXN1-205ENST00000506963 WNK4Q96J92 1243 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 CCDC17Q96LX7 622 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 TBC1D2Q9BYX2 928 aa11.6□□□□□ -0.55
SFXN1-205ENST00000506963 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
SFXN1-205ENST00000506963 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms