RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 HSP90AB4PQ58FF6 505 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 EXOSC6Q5RKV6 272 aaKnown RBP6.6□□□□□ -1.35
CLDND1-212ENST00000506885 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 ERMP1Q7Z2K6 904 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 FAM46AQ96IP4 442 aaKnown RBP6.6□□□□□ -1.35
CLDND1-212ENST00000506885 UBL7Q96S82 380 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-212ENST00000506885 UBA5Q9GZZ9 404 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 C12orf49Q9H741 205 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 HIF3AQ9Y2N7 669 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 RAXQ9Y2V3 346 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 B3GALT4O96024 378 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-212ENST00000506885 ST13P50502 369 aaKnown RBP6.59□□□□□ -1.35
CLDND1-212ENST00000506885 RHBDL3P58872 404 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 ARSHQ5FYA8 562 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 MEI1Q5TIA1 1274 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 MCTP1Q6DN14 999 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 APPBP2Q92624 585 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
CLDND1-212ENST00000506885 USP26Q9BXU7 913 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 SUGCTQ9HAC7 445 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.35
CLDND1-212ENST00000506885 STOML1Q9UBI4 398 aa6.59□□□□□ -1.35
CLDND1-212ENST00000506885 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
CLDND1-212ENST00000506885 GIPC1O14908 333 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 ETFBP38117 255 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 RAB33AQ14088 237 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLDND1-212ENST00000506885 FERMT3Q86UX7 667 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 SMG8Q8ND04 991 aaKnown RBP6.58□□□□□ -1.36
CLDND1-212ENST00000506885 SGSM3Q96HU1 749 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 MYRFLQ96LU7 910 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 IER2Q9BTL4 223 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 TMPRSS13Q9BYE2 586 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 SRCIN1Q9C0H9 1055 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 ZNF576Q9H609 170 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 COPRSQ9NQ92 184 aa6.58□□□□□ -1.36
CLDND1-212ENST00000506885 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 KLF4O43474 513 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 HYAL3O43820 417 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-212ENST00000506885 GAS2O43903 313 aaKnown RBP6.57□□□□□ -1.36
CLDND1-212ENST00000506885 GYS2P54840 703 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 AP3B2Q13367 1082 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 BIRC2Q13490 618 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 GRM2Q14416 872 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 POU4F3Q15319 338 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 ZNF423Q2M1K9 1284 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-212ENST00000506885 KIAA0907Q7Z7F0 614 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-212ENST00000506885 CLEC10AQ8IUN9 316 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 EPS8L3Q8TE67 593 aaKnown RBP6.57□□□□□ -1.36
CLDND1-212ENST00000506885 CEP89Q96ST8 783 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 CORO1BQ9BR76 489 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 SPON2Q9BUD6 331 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 KANSL2Q9H9L4 492 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 TTF2Q9UNY4 1162 aaKnown RBP6.57□□□□□ -1.36
CLDND1-212ENST00000506885 MRVI1Q9Y6F6 885 aa6.57□□□□□ -1.36
CLDND1-212ENST00000506885 CENPBP07199 599 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-212ENST00000506885 FSTP19883 344 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 PPP2R3AQ06190 1150 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-212ENST00000506885 DTHD1Q6ZMT9 781 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 TSHZ1Q6ZSZ6 1077 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 KIAA0825Q8IV33 1275 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-212ENST00000506885 HNRNPLLQ8WVV9 542 aaKnown RBP6.56□□□□□ -1.36
CLDND1-212ENST00000506885 EVI5LQ96CN4 794 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 C8orf48Q96LL4 319 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 RPS6KC1Q96S38 1066 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 OSBPL7Q9BZF2 842 aa6.56□□□□□ -1.36
CLDND1-212ENST00000506885 ESYT3A0FGR9 886 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 CCDC85CA6NKD9 419 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 FAM20CQ8IXL6 584 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 ARMC10Q8N2F6 343 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 BCO2Q9BYV7 579 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 FAM8A1Q9UBU6 413 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
CLDND1-212ENST00000506885 R3HCC1Q9Y3T6 440 aaKnown RBP6.55□□□□□ -1.36
CLDND1-212ENST00000506885 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 PPFIA4O75335 1185 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 USP17L7P0C7H9 530 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 BMP3P12645 472 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 MAOBP27338 520 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 MASP1P48740 699 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 PI16Q6UXB8 463 aa6.54□□□□□ -1.36
CLDND1-212ENST00000506885 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms