RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-209ENST00000504872 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 DDTLA6NHG4 134 aaPredicted RBP12.95□□□□□ -0.34
APBB3-209ENST00000504872 RNF113AO15541 343 aaKnown RBP12.95□□□□□ -0.34
APBB3-209ENST00000504872 FKTNO75072 461 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 METTL16Q86W50 562 aaKnown RBP12.95□□□□□ -0.34
APBB3-209ENST00000504872 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 EVI5LQ96CN4 794 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.95□□□□□ -0.348e-7■■■□□ 19
APBB3-209ENST00000504872 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
APBB3-209ENST00000504872 ZNF112Q9UJU3 913 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
APBB3-209ENST00000504872 ATRNL1Q5VV63 1379 aa12.94□□□□□ -0.34
APBB3-209ENST00000504872 TBC1D12O60347 775 aa12.94□□□□□ -0.34
APBB3-209ENST00000504872 ZFYP08048 801 aaPredicted RBP12.94□□□□□ -0.34
APBB3-209ENST00000504872 TCP10Q12799 353 aa12.94□□□□□ -0.34
APBB3-209ENST00000504872 MOB2Q70IA6 237 aa12.94□□□□□ -0.34
APBB3-209ENST00000504872 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
APBB3-209ENST00000504872 MTMR10Q9NXD2 777 aa12.94□□□□□ -0.34
APBB3-209ENST00000504872 COL2A1P02458 1487 aaPredicted RBP12.93□□□□□ -0.34
APBB3-209ENST00000504872 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 NEFLP07196 543 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 TEX11Q8IYF3 940 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 TGFBRAP1Q8WUH2 860 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
APBB3-209ENST00000504872 OSBPL5Q9H0X9 879 aaPredicted RBP12.93□□□□□ -0.34
APBB3-209ENST00000504872 PPP4R2Q9NY27 417 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
APBB3-209ENST00000504872 PHF20L1A8MW92 1017 aa12.92□□□□□ -0.34
APBB3-209ENST00000504872 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
APBB3-209ENST00000504872 NF2P35240 595 aa12.92□□□□□ -0.34
APBB3-209ENST00000504872 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.92□□□□□ -0.34
APBB3-209ENST00000504872 LCORLQ8N3X6 602 aa12.92□□□□□ -0.34
APBB3-209ENST00000504872 APPBP2Q92624 585 aa12.92□□□□□ -0.34
APBB3-209ENST00000504872 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
APBB3-209ENST00000504872 NOL10Q9BSC4 688 aaKnown RBP12.92□□□□□ -0.34
APBB3-209ENST00000504872 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
APBB3-209ENST00000504872 CACNA1AO00555 2505 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
APBB3-209ENST00000504872 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 ARMC9Q7Z3E5 817 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 FOXP4Q8IVH2 680 aaPredicted RBP12.91□□□□□ -0.34
APBB3-209ENST00000504872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
APBB3-209ENST00000504872 FAM122AQ96E09 287 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 SEC62Q99442 399 aaKnown RBP12.91□□□□□ -0.34
APBB3-209ENST00000504872 ARMT1Q9H993 441 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 DCP1AQ9NPI6 582 aaPredicted RBP12.91□□□□□ -0.34
APBB3-209ENST00000504872 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
APBB3-209ENST00000504872 FLT1P17948 1338 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 PRKAB2O43741 272 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 SLURP2P0DP57 97 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 PICALMQ13492 652 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
APBB3-209ENST00000504872 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 ZNF333Q96JL9 665 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 SNX27Q96L92 541 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 CRNKL1Q9BZJ0 848 aaKnown RBP12.9□□□□□ -0.34
APBB3-209ENST00000504872 ATP8A2Q9NTI2 1148 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 PI4KBQ9UBF8 816 aa12.9□□□□□ -0.34
APBB3-209ENST00000504872 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
APBB3-209ENST00000504872 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.35
APBB3-209ENST00000504872 FOXP2O15409 715 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 MBD4O95243 580 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 SDSP20132 328 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
APBB3-209ENST00000504872 PRKG1Q13976 671 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
APBB3-209ENST00000504872 ANKRD13AQ8IZ07 590 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
APBB3-209ENST00000504872 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
APBB3-209ENST00000504872 M0R2C6 588 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 TM4SF4P48230 202 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 PLCD1P51178 756 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 GABPAQ06546 454 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 RRP1BQ14684 758 aaKnown RBP12.88□□□□□ -0.35
APBB3-209ENST00000504872 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 EHD4Q9H223 541 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 DNAJC18Q9H819 358 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 HERC5Q9UII4 1024 aaKnown RBP12.88□□□□□ -0.35
APBB3-209ENST00000504872 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
APBB3-209ENST00000504872 GPAA1O43292 621 aa12.87□□□□□ -0.35
APBB3-209ENST00000504872 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
APBB3-209ENST00000504872 INPP5BP32019 993 aa12.87□□□□□ -0.35
APBB3-209ENST00000504872 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms