RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 HOOK2Q96ED9 719 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 SNCAIPQ9Y6H5 919 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 KIAA0100Q14667 2235 aaKnown RBP11.39□□□□□ -0.59
DHFR-202ENST00000504396 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
DHFR-202ENST00000504396 H0YGN5 161 aa11.38□□□□□ -0.59
DHFR-202ENST00000504396 IRF6O14896 467 aa11.38□□□□□ -0.59
DHFR-202ENST00000504396 HDLBPQ00341 1268 aaKnown RBP11.38□□□□□ -0.59
DHFR-202ENST00000504396 GRIK5Q16478 980 aa11.38□□□□□ -0.59
DHFR-202ENST00000504396 DCAF15Q66K64 600 aa11.38□□□□□ -0.59
DHFR-202ENST00000504396 DPF3Q92784 378 aa11.38□□□□□ -0.59
DHFR-202ENST00000504396 MAST3O60307 1309 aa11.37□□□□□ -0.59
DHFR-202ENST00000504396 MYH13Q9UKX3 1938 aa11.37□□□□□ -0.59
DHFR-202ENST00000504396 PPIL2Q13356 520 aa11.37□□□□□ -0.59
DHFR-202ENST00000504396 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
DHFR-202ENST00000504396 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
DHFR-202ENST00000504396 RAET1EQ8TD07 263 aa11.37□□□□□ -0.59
DHFR-202ENST00000504396 ZCCHC17Q9NP64 241 aaKnown RBP11.37□□□□□ -0.59
DHFR-202ENST00000504396 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
DHFR-202ENST00000504396 CPA4Q9UI42 421 aa11.37□□□□□ -0.59
DHFR-202ENST00000504396 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
DHFR-202ENST00000504396 GNRH1P01148 92 aa11.36□□□□□ -0.59
DHFR-202ENST00000504396 LRRC24Q50LG9 513 aa11.36□□□□□ -0.59
DHFR-202ENST00000504396 ZNF341Q9BYN7 854 aa11.36□□□□□ -0.59
DHFR-202ENST00000504396 BICC1Q9H694 974 aaKnown RBP11.36□□□□□ -0.59
DHFR-202ENST00000504396 AK9Q5TCS8 1911 aa11.36□□□□□ -0.59
DHFR-202ENST00000504396 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
DHFR-202ENST00000504396 HOXD10P28358 340 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 PSMC4P43686 418 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 PRMT2P55345 433 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 TCP10Q12799 353 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 MTFR1Q15390 333 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 MRIQ9BWK5 157 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 TSR3Q9UJK0 312 aaKnown RBP11.35□□□□□ -0.59
DHFR-202ENST00000504396 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 PDHXO00330 501 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 GPR37O15354 613 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 IFIT1P09914 478 aaKnown RBP11.35□□□□□ -0.59
DHFR-202ENST00000504396 INPP5BP32019 993 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 PPATQ06203 517 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 HIC1Q14526 733 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 FKBP1CQ5VVH2 108 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 FAM83AQ86UY5 434 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 KLHDC4Q8TBB5 520 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 SRRDQ9UH36 339 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 ADGRG1Q9Y653 693 aa11.35□□□□□ -0.59
DHFR-202ENST00000504396 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
DHFR-202ENST00000504396 UTYO14607 1347 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 PDE8BO95263 885 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 GRK4P32298 578 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 PUM3Q15397 648 aaKnown RBP11.34□□□□□ -0.59
DHFR-202ENST00000504396 APOBEC3HQ6NTF7 200 aaKnown RBP11.34□□□□□ -0.59
DHFR-202ENST00000504396 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
DHFR-202ENST00000504396 RNF40O75150 1001 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 SLC5A1P13866 664 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 UBXN2AP68543 259 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 RABL6Q3YEC7 729 aaPredicted RBP11.33□□□□□ -0.6
DHFR-202ENST00000504396 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 ANKRD23Q86SG2 305 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 SHISA4Q96DD7 197 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 PARK7Q99497 189 aaKnown RBP11.33□□□□□ -0.6
DHFR-202ENST00000504396 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 RNF208Q9H0X6 261 aa11.33□□□□□ -0.6
DHFR-202ENST00000504396 CCL5P13501 91 aa11.32□□□□□ -0.6
DHFR-202ENST00000504396 FECHP22830 423 aa11.32□□□□□ -0.6
DHFR-202ENST00000504396 CTGFP29279 349 aa11.32□□□□□ -0.6
DHFR-202ENST00000504396 FCGRTP55899 365 aa11.32□□□□□ -0.6
DHFR-202ENST00000504396 SWT1Q5T5J6 900 aaKnown RBP11.32□□□□□ -0.6
DHFR-202ENST00000504396 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
DHFR-202ENST00000504396 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
DHFR-202ENST00000504396 CYP2C8P10632 490 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 PPP4CP60510 307 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 PRKCZQ05513 592 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 DIXDC1Q155Q3 683 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
DHFR-202ENST00000504396 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
DHFR-202ENST00000504396 ANP32CO43423 234 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
DHFR-202ENST00000504396 GJA8P48165 433 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 NFIAQ12857 509 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 CDC42EP5Q6NZY7 148 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 ZSCAN29Q8IWY8 852 aaPredicted RBP11.3□□□□□ -0.6
DHFR-202ENST00000504396 FAM9BQ8IZU0 186 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms