RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF280CQ8ND82 737 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 LBHD1Q9BQE6 289 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 NUDT12Q9BQG2 462 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 TBC1D2Q9BYX2 928 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 PRDM6Q9NQX0 595 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 GAKO14976 1311 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 SEMA3EO15041 775 aa19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 TBC1D12O60347 775 aa19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 XRCC5P13010 732 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 HMGCS2P54868 508 aa19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 TRMT44Q8IYL2 757 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 DDX4Q9NQI0 724 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 MORF4L1Q9UBU8 362 aa19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 FRMPD3Q5JV73 1810 aa19.74■□□□□ 0.75
PDLIM7-210ENST00000503827 DZIP1Q86YF9 867 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-210ENST00000503827 SOCS4Q8WXH5 440 aa19.73■□□□□ 0.75
PDLIM7-210ENST00000503827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■■■■ 52.9
PDLIM7-210ENST00000503827 SALL2Q9Y467 1007 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-210ENST00000503827 ZKSCAN1P17029 563 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-210ENST00000503827 ATP2B3Q16720 1220 aa19.72■□□□□ 0.75
PDLIM7-210ENST00000503827 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
PDLIM7-210ENST00000503827 BTDP43251 543 aa19.71■□□□□ 0.75
PDLIM7-210ENST00000503827 CACNB2Q08289 660 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-210ENST00000503827 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
PDLIM7-210ENST00000503827 FAM163AQ96GL9 167 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-210ENST00000503827 FAM196BA6NMK8 535 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 USP17L5A8MUK1 530 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 RFX5P48382 616 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 IRX3P78415 501 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 SH3D19Q5HYK7 790 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 LHX8Q68G74 356 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 MAFAQ8NHW3 353 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 CDX2Q99626 313 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 AS3MTQ9HBK9 375 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 CEP126Q9P2H0 1117 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 ABCF2Q9UG63 623 aa19.7■□□□□ 0.74
PDLIM7-210ENST00000503827 CCND3P30281 292 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-210ENST00000503827 PHKA1P46020 1223 aa19.69■□□□□ 0.74
PDLIM7-210ENST00000503827 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
PDLIM7-210ENST00000503827 ATG9AQ7Z3C6 839 aa19.69■□□□□ 0.74
PDLIM7-210ENST00000503827 GPRC5AQ8NFJ5 357 aa19.69■□□□□ 0.74
PDLIM7-210ENST00000503827 MAPK4P31152 587 aa19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 CAP2P40123 477 aa19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 SPTY2D1Q68D10 685 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 CCAR1Q8IX12 1150 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 SYMPKQ92797 1274 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 PRKAG2Q9UGJ0 569 aa19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 FBXO3Q9UK99 471 aa19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 MROH7-TTC4A0A0A0MT08 1334 aa19.68■□□□□ 0.74
PDLIM7-210ENST00000503827 LTBP2Q14767 1821 aa19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 ZBTB22O15209 634 aa19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 RGS2P41220 211 aa19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 SENP6Q9GZR1 1112 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 USP44Q9H0E7 712 aa19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 TMOD4Q9NZQ9 345 aa19.67■□□□□ 0.74
PDLIM7-210ENST00000503827 CIAO1O76071 339 aa19.66■□□□□ 0.74
PDLIM7-210ENST00000503827 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-210ENST00000503827 P2RX7Q99572 595 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-210ENST00000503827 SIL1Q9H173 461 aa19.66■□□□□ 0.74
PDLIM7-210ENST00000503827 SEMA6BQ9H3T3 888 aa19.66■□□□□ 0.74
PDLIM7-210ENST00000503827 GPR75-ASB3A0A0A6YYF3 556 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 RHBDL3P58872 404 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 HERVK_113P62684 666 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 CCL14Q16627 93 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 CCDC102BQ68D86 513 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 USP6NLQ92738 828 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 APBA2Q99767 749 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 TXNRD2Q9NNW7 524 aa19.65■□□□□ 0.74
PDLIM7-210ENST00000503827 PEX10O60683 326 aa19.64■□□□□ 0.73
PDLIM7-210ENST00000503827 MAP4K4O95819 1239 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-210ENST00000503827 MTMR2Q13614 643 aa19.64■□□□□ 0.73
PDLIM7-210ENST00000503827 WDR18Q9BV38 432 aa19.64■□□□□ 0.73
PDLIM7-210ENST00000503827 PDS5AQ29RF7 1337 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-210ENST00000503827 PTPRCP08575 1304 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 BACE1P56817 501 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 RASGRF1Q13972 1273 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 MORN1Q5T089 497 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 ERICH6Q7L0X2 663 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 GPR142Q7Z601 462 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 PLEKHH3Q7Z736 793 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 GTF3C2Q8WUA4 911 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 MYLIPQ8WY64 445 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 RBPJLQ9UBG7 517 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 HERC5Q9UII4 1024 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 VCANP13611 3396 aa19.63■□□□□ 0.73
PDLIM7-210ENST00000503827 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 ATN1P54259 1190 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 ERVK-9P63128 1117 aa19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 ERVK-24P63145 666 aa19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 MECOMQ03112 1051 aa19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 RRP1BQ14684 758 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 SHHQ15465 462 aa19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 Q3C1V9 767 aa19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-210ENST00000503827 MSCO60682 206 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 LDHCP07864 332 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms