RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 PLEKHG4Q58EX7 1191 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 FAM117BQ6P1L5 589 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 SULF2Q8IWU5 870 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 MICAL1Q8TDZ2 1067 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 SH3TC2Q8TF17 1288 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 FERD3LQ96RJ6 166 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 DNAJC7Q99615 494 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 TNKS2Q9H2K2 1166 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 ST7Q9NRC1 585 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 CYP8B1Q9UNU6 501 aa6.95□□□□□ -1.3
SCLT1-206ENST00000503565 DYRK3O43781 588 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 LMNB1P20700 586 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 ZNF165P49910 485 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 DUOXA2Q1HG44 320 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 FBXW10Q5XX13 1052 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 GK5Q6ZS86 529 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 ACAD11Q709F0 780 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
SCLT1-206ENST00000503565 REXO1Q8N1G1 1221 aaKnown RBP6.94□□□□□ -1.3
SCLT1-206ENST00000503565 TP53INP1Q96A56 240 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 SOX17Q9H6I2 414 aaPredicted RBP6.94□□□□□ -1.3
SCLT1-206ENST00000503565 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
SCLT1-206ENST00000503565 CLSTN1O94985 981 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 ARNTP27540 789 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 ZNF252P-AS1Q0IIN9 211 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 MPRIPQ6WCQ1 1025 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
SCLT1-206ENST00000503565 SEMA6BQ9H3T3 888 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 FANCLQ9NW38 375 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 POLR3KQ9Y2Y1 108 aaPredicted RBP6.93□□□□□ -1.3
SCLT1-206ENST00000503565 SAMM50Q9Y512 469 aa6.93□□□□□ -1.3
SCLT1-206ENST00000503565 LOC100289279A0A1B0GTE1 492 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 RAB11FIP3O75154 756 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 ECEL1O95672 775 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 PDZD3Q86UT5 571 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 ARMC10Q8N2F6 343 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 BRINP2Q9C0B6 783 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 EHMT1Q9H9B1 1298 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
SCLT1-206ENST00000503565 hCG_2014768A0A024R1R8 64 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 ESYT3A0FGR9 886 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 FAM177BA6PVY3 158 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 PDPK1O15530 556 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 CDC45O75419 566 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 TRIM37O94972 964 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 H2AFB2P0C5Z0 115 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 CHMP4BP1P59074 171 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 IGBP1P78318 339 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 GSTM4Q03013 218 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 RASGRF1Q13972 1273 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 LRRC14Q15048 493 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 RNF187Q5TA31 235 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-206ENST00000503565 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-206ENST00000503565 RUFY4Q6ZNE9 571 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 FILIP1Q7Z7B0 1213 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 FAM46AQ96IP4 442 aaKnown RBP6.91□□□□□ -1.3
SCLT1-206ENST00000503565 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 PCDHB14Q9Y5E9 798 aa6.91□□□□□ -1.3
SCLT1-206ENST00000503565 MEGF11A6BM72 1044 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 BPNT1O95861 308 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 IMPDH2P12268 514 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 GLB1P16278 677 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 CDK8P49336 464 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 CASP7P55210 303 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 RPL6Q02878 288 aaKnown RBP6.9□□□□□ -1.3
SCLT1-206ENST00000503565 SQSTM1Q13501 440 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
SCLT1-206ENST00000503565 TMPRSS13Q9BYE2 586 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 ANTXR1Q9H6X2 564 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 COL4A3BPQ9Y5P4 624 aa6.9□□□□□ -1.3
SCLT1-206ENST00000503565 B2RBV5 119 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 GRIN3BO60391 1043 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 ATE1O95260 518 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 GJB6O95452 261 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 ARL4DP49703 201 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 FXNQ16595 210 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 PRR23CQ6ZRP0 262 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 RUSC1Q9BVN2 902 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 USP26Q9BXU7 913 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 EMILIN2Q9BXX0 1053 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 PCDH12Q9NPG4 1184 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 TMEM260Q9NX78 707 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 CACNA2D2Q9NY47 1150 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 LEMD3Q9Y2U8 911 aa6.89□□□□□ -1.31
SCLT1-206ENST00000503565 NOP58Q9Y2X3 529 aaKnown RBP6.89□□□□□ -1.31
SCLT1-206ENST00000503565 DNAJC6O75061 913 aa6.88□□□□□ -1.31
SCLT1-206ENST00000503565 MAOBP27338 520 aa6.88□□□□□ -1.31
SCLT1-206ENST00000503565 PREPP48147 710 aa6.88□□□□□ -1.31
SCLT1-206ENST00000503565 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-206ENST00000503565 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
SCLT1-206ENST00000503565 KIAA0907Q7Z7F0 614 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-206ENST00000503565 APPBP2Q92624 585 aa6.88□□□□□ -1.31
SCLT1-206ENST00000503565 CWC22Q9HCG8 908 aaKnown RBP6.88□□□□□ -1.31
SCLT1-206ENST00000503565 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms