RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 SLC4A4Q9Y6R1 1079 aa21.34■■□□□ 1.01
SMAD1-204ENST00000503324 MAP2K2P36507 400 aa21.33■■□□□ 1.01
SMAD1-204ENST00000503324 NOGQ13253 232 aa21.33■■□□□ 1.01
SMAD1-204ENST00000503324 SLC4A8Q2Y0W8 1093 aa21.33■■□□□ 1.01
SMAD1-204ENST00000503324 ELP3Q9H9T3 547 aa21.33■■□□□ 1.01
SMAD1-204ENST00000503324 PPP4R2Q9NY27 417 aa21.33■■□□□ 1.01
SMAD1-204ENST00000503324 HERC5Q9UII4 1024 aaKnown RBP21.33■■□□□ 1.01
SMAD1-204ENST00000503324 GJA5P36382 358 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 EVX2Q03828 476 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 NOL9Q5SY16 702 aaKnown RBP21.32■■□□□ 1
SMAD1-204ENST00000503324 SPRYD7Q5W111 196 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
SMAD1-204ENST00000503324 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 WNK4Q96J92 1243 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 FAM227BQ96M60 508 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.32■■□□□ 1
SMAD1-204ENST00000503324 MCM9Q9NXL9 1143 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 CSADQ9Y600 493 aa21.32■■□□□ 1
SMAD1-204ENST00000503324 A0A0D9SFI3 127 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 GSG1L2A8MUP6 293 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 HLA-DOAP06340 250 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 SDSP20132 328 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 PLCD1P51178 756 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 RRP1BQ14684 758 aaKnown RBP21.31■■□□□ 1
SMAD1-204ENST00000503324 EHD4Q9H223 541 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.31■■□□□ 1
SMAD1-204ENST00000503324 PCNTO95613 3336 aa21.31■■□□□ 1
SMAD1-204ENST00000503324 SPDYE5A6NIY4 337 aa21.3■■□□□ 1
SMAD1-204ENST00000503324 KIF23Q02241 960 aaPredicted RBP21.3■■□□□ 1
SMAD1-204ENST00000503324 MKRN3Q13064 507 aaKnown RBP21.3■■□□□ 1
SMAD1-204ENST00000503324 NMIQ13287 307 aaPredicted RBP21.3■■□□□ 1
SMAD1-204ENST00000503324 CCDC129Q6ZRS4 1044 aa21.3■■□□□ 1
SMAD1-204ENST00000503324 TTC6Q86TZ1 520 aa21.3■■□□□ 1
SMAD1-204ENST00000503324 OPTNQ96CV9 577 aa21.3■■□□□ 1
SMAD1-204ENST00000503324 HELLSQ9NRZ9 838 aa21.3■■□□□ 1
SMAD1-204ENST00000503324 ZBTB48P10074 688 aaPredicted RBP21.29■■□□□ 1
SMAD1-204ENST00000503324 CYP2D6P10635 497 aa21.29■■□□□ 1
SMAD1-204ENST00000503324 GNAT2P19087 354 aa21.29■■□□□ 1
SMAD1-204ENST00000503324 EPB41L4AQ9HCS5 686 aaPredicted RBP21.29■■□□□ 1
SMAD1-204ENST00000503324 BAZ2AQ9UIF9 1905 aaKnown RBP21.29■■□□□ 1
SMAD1-204ENST00000503324 FOXP2O15409 715 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
SMAD1-204ENST00000503324 POLR3DP05423 398 aaPredicted RBP21.28■■□□□ 1
SMAD1-204ENST00000503324 GABPAQ06546 454 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 GIMAP6Q6P9H5 292 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 ERO1BQ86YB8 467 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 SCYL3Q8IZE3 742 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 CRACR2BQ8N4Y2 399 aaPredicted RBP21.28■■□□□ 1
SMAD1-204ENST00000503324 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 LAMB1P07942 1786 aa21.28■■□□□ 1
SMAD1-204ENST00000503324 DOCK1Q14185 1865 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 CYP2D7A0A087X1C5 515 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 PATL2C9JE40 543 aaKnown RBP21.27■■□□□ 1
SMAD1-204ENST00000503324 USP17L12C9JPN9 530 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 USP17L21D6R901 530 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 SMIM22K7EJ46 135 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 MCMDC2Q4G0Z9 681 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 C12orf60Q5U649 245 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 CTR9Q6PD62 1173 aa21.27■■□□□ 1
SMAD1-204ENST00000503324 CAP2P40123 477 aa21.26■□□□□ 0.99
SMAD1-204ENST00000503324 ZNF589Q86UQ0 364 aaPredicted RBP21.26■□□□□ 0.99
SMAD1-204ENST00000503324 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
SMAD1-204ENST00000503324 DDRGK1Q96HY6 314 aa21.26■□□□□ 0.99
SMAD1-204ENST00000503324 WBP1LQ9NX94 342 aa21.26■□□□□ 0.99
SMAD1-204ENST00000503324 PTPRAP18433 802 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 SHMT1P34896 483 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 JAG1P78504 1218 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 MAP2K1Q02750 393 aaPredicted RBP21.25■□□□□ 0.99
SMAD1-204ENST00000503324 SBK1Q52WX2 424 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 VPS53Q5VIR6 699 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 TATDN1Q6P1N9 297 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 IFNL3Q8IZI9 196 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 TRIM34Q9BYJ4 488 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 DIAPH3Q9NSV4 1193 aa21.25■□□□□ 0.99
SMAD1-204ENST00000503324 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.25■□□□□ 0.99
SMAD1-204ENST00000503324 ARPP21Q9UBL0 812 aaPredicted RBP21.25■□□□□ 0.99
SMAD1-204ENST00000503324 HIP1O00291 1037 aa21.24■□□□□ 0.99
SMAD1-204ENST00000503324 IRF6O14896 467 aa21.24■□□□□ 0.99
SMAD1-204ENST00000503324 PPATQ06203 517 aa21.24■□□□□ 0.99
SMAD1-204ENST00000503324 PPIL2Q13356 520 aa21.24■□□□□ 0.99
SMAD1-204ENST00000503324 SHROOM1Q2M3G4 852 aaPredicted RBP21.24■□□□□ 0.99
SMAD1-204ENST00000503324 DYNLL2Q96FJ2 89 aa21.24■□□□□ 0.99
SMAD1-204ENST00000503324 MS4A4AQ96JQ5 239 aa21.24■□□□□ 0.99
SMAD1-204ENST00000503324 ATAD5Q96QE3 1844 aa21.23■□□□□ 0.99
SMAD1-204ENST00000503324 APPP05067 770 aa21.23■□□□□ 0.99
SMAD1-204ENST00000503324 TM4SF4P48230 202 aa21.23■□□□□ 0.99
SMAD1-204ENST00000503324 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
SMAD1-204ENST00000503324 REM2Q8IYK8 340 aaPredicted RBP21.23■□□□□ 0.99
SMAD1-204ENST00000503324 PICK1Q9NRD5 415 aa21.23■□□□□ 0.99
SMAD1-204ENST00000503324 TAOK2Q9UL54 1235 aa21.23■□□□□ 0.99
SMAD1-204ENST00000503324 CCDC171Q6TFL3 1326 aa21.23■□□□□ 0.99
SMAD1-204ENST00000503324 TESPA1A2RU30 521 aaPredicted RBP21.22■□□□□ 0.99
SMAD1-204ENST00000503324 MANSC4A6NHS7 340 aaPredicted RBP21.22■□□□□ 0.99
SMAD1-204ENST00000503324 GDF11O95390 407 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 HSPA1AP0DMV8 641 aaKnown RBP21.22■□□□□ 0.99
SMAD1-204ENST00000503324 HSPA1BP0DMV9 641 aaKnown RBP21.22■□□□□ 0.99
SMAD1-204ENST00000503324 TDO2P48775 406 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 CCDC84Q86UT8 332 aaPredicted RBP21.22■□□□□ 0.99
SMAD1-204ENST00000503324 AMOTL1Q8IY63 956 aa21.22■□□□□ 0.99
SMAD1-204ENST00000503324 SLC44A5Q8NCS7 719 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms