RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 ANTXR2P58335 489 aa18.02■□□□□ 0.47
MBD4-204ENST00000503197 DHX32Q7L7V1 743 aaKnown RBP18.02■□□□□ 0.47
MBD4-204ENST00000503197 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.47
MBD4-204ENST00000503197 VEZTQ9HBM0 779 aa18.02■□□□□ 0.47
MBD4-204ENST00000503197 PRDM1O75626 825 aa18.01■□□□□ 0.47
MBD4-204ENST00000503197 TRDNQ13061 729 aa18.01■□□□□ 0.47
MBD4-204ENST00000503197 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
MBD4-204ENST00000503197 CHST3Q7LGC8 479 aa18.01■□□□□ 0.47
MBD4-204ENST00000503197 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
MBD4-204ENST00000503197 CNNM2Q9H8M5 875 aa18.01■□□□□ 0.47
MBD4-204ENST00000503197 PDRG1Q9NUG6 133 aa18.01■□□□□ 0.47
MBD4-204ENST00000503197 PCP11498 1178 aaKnown RBP18■□□□□ 0.47
MBD4-204ENST00000503197 GABPAQ06546 454 aa18■□□□□ 0.47
MBD4-204ENST00000503197 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
MBD4-204ENST00000503197 TTC6Q86TZ1 520 aa18■□□□□ 0.47
MBD4-204ENST00000503197 SLC44A5Q8NCS7 719 aa18■□□□□ 0.47
MBD4-204ENST00000503197 KRT23Q9C075 422 aa18■□□□□ 0.47
MBD4-204ENST00000503197 ZSWIM5Q9P217 1185 aa18■□□□□ 0.47
MBD4-204ENST00000503197 ORC4O43929 436 aa18■□□□□ 0.47
MBD4-204ENST00000503197 KDM4AO75164 1064 aa18■□□□□ 0.47
MBD4-204ENST00000503197 SLC3A2P08195 630 aaKnown RBP18■□□□□ 0.47
MBD4-204ENST00000503197 AK2P54819 239 aa18■□□□□ 0.47
MBD4-204ENST00000503197 RRP12Q5JTH9 1297 aaKnown RBP18■□□□□ 0.47
MBD4-204ENST00000503197 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
MBD4-204ENST00000503197 ALDH8A1Q9H2A2 487 aaPredicted RBP18■□□□□ 0.47
MBD4-204ENST00000503197 DHX36Q9H2U1 1008 aaKnown RBP18■□□□□ 0.47
MBD4-204ENST00000503197 SCAF8Q9UPN6 1271 aaKnown RBP18■□□□□ 0.47
MBD4-204ENST00000503197 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
MBD4-204ENST00000503197 MCM5P33992 734 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 FAM83AQ86UY5 434 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 IL27Q8NEV9 243 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 FAM151AQ8WW52 585 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 ADARB2Q9NS39 739 aaKnown RBP17.99■□□□□ 0.47
MBD4-204ENST00000503197 TOMM22Q9NS69 142 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 PGAP2Q9UHJ9 254 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 HACL1Q9UJ83 578 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 PDE4BQ07343 736 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 TOB2Q14106 344 aaPredicted RBP17.99■□□□□ 0.47
MBD4-204ENST00000503197 TMEM39BQ9GZU3 492 aa17.99■□□□□ 0.47
MBD4-204ENST00000503197 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 PRC1O43663 620 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 CDK8P49336 464 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 Q6ZUG5 572 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 ZSCAN29Q8IWY8 852 aaPredicted RBP17.98■□□□□ 0.47
MBD4-204ENST00000503197 CDAN1Q8IWY9 1227 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 LARP6Q9BRS8 491 aaKnown RBP17.98■□□□□ 0.47
MBD4-204ENST00000503197 AGXT2Q9BYV1 514 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 EHD4Q9H223 541 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
MBD4-204ENST00000503197 SERPINB13Q9UIV8 391 aa17.98■□□□□ 0.47
MBD4-204ENST00000503197 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 DNAJC18Q9H819 358 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 WDR90Q96KV7 1748 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 SCN4AP35499 1836 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 POTECB2RU33 542 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 RASA1P20936 1047 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 ANGEL2Q5VTE6 544 aaKnown RBP17.97■□□□□ 0.47
MBD4-204ENST00000503197 NOL8Q76FK4 1167 aaKnown RBP17.97■□□□□ 0.47
MBD4-204ENST00000503197 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
MBD4-204ENST00000503197 FBXL16Q8N461 479 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 ESR2Q92731 530 aa17.97■□□□□ 0.47
MBD4-204ENST00000503197 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
MBD4-204ENST00000503197 RANBP6O60518 1105 aaKnown RBP17.96■□□□□ 0.47
MBD4-204ENST00000503197 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
MBD4-204ENST00000503197 RASA3Q14644 834 aa17.96■□□□□ 0.47
MBD4-204ENST00000503197 HSCBQ8IWL3 235 aa17.96■□□□□ 0.47
MBD4-204ENST00000503197 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
MBD4-204ENST00000503197 FAM196BA6NMK8 535 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 SHMT1P34896 483 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 FAM47AQ5JRC9 791 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 IGDCC4Q8TDY8 1250 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 TEPSINQ96N21 525 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 MYH8P13535 1937 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 K7ELQ4 463 aaPredicted RBP17.95■□□□□ 0.46
MBD4-204ENST00000503197 MCM2P49736 904 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 TNFAIP1Q13829 316 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 BECN1Q14457 450 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 BRF1Q92994 677 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 ZKSCAN3Q9BRR0 538 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 GGA3Q9NZ52 723 aa17.95■□□□□ 0.46
MBD4-204ENST00000503197 EPHX2P34913 555 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 TNNI2P48788 182 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
MBD4-204ENST00000503197 DEFB129Q9H1M3 183 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 TPCN1Q9ULQ1 816 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 SH2B2O14492 632 aaPredicted RBP17.94■□□□□ 0.46
MBD4-204ENST00000503197 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 ZNF287Q9HBT7 754 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 SENP2Q9HC62 589 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 SWAP70Q9UH65 585 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
MBD4-204ENST00000503197 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
MBD4-204ENST00000503197 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
MBD4-204ENST00000503197 NMT2O60551 498 aa17.93■□□□□ 0.46
MBD4-204ENST00000503197 LARGE1O95461 756 aa17.93■□□□□ 0.46
MBD4-204ENST00000503197 TFAP4Q01664 338 aa17.93■□□□□ 0.46
MBD4-204ENST00000503197 ANKRD1Q15327 319 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms