RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 TIAF1O95411 115 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 PLCG1P19174 1290 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 PRRT3Q5FWE3 981 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 ZBTB37Q5TC79 503 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 TMEM130Q8N3G9 435 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 TMEM40Q8WWA1 233 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 FANCD2OSQ96PS1 177 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 CYP4F12Q9HCS2 524 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 ADAM30Q9UKF2 790 aa12.32□□□□□ -0.44
EXOSC9-203ENST00000503139 FANCGO15287 622 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 SHISA2Q6UWI4 295 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 ZSCAN1Q8NBB4 408 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 GSX1Q9H4S2 264 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 GMIPQ9P107 970 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 CNTNAP5Q8WYK1 1306 aa12.31□□□□□ -0.44
EXOSC9-203ENST00000503139 F8W735 103 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 CASP7P55210 303 aa12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 OVOS1Q6IE37 1185 aa12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 NOP9Q86U38 636 aaKnown RBP12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 C19orf47Q8N9M1 422 aaKnown RBP12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 SIRPGQ9P1W8 387 aa12.3□□□□□ -0.44
EXOSC9-203ENST00000503139 SLC22A31A6NKX4 558 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 PGRP06401 933 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 GRIK4Q16099 956 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 PODNQ7Z5L7 613 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 BEND7Q8N7W2 519 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 ACSF2Q96CM8 615 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 TM9SF2Q99805 663 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 TRIM55Q9BYV6 548 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 TNKS2Q9H2K2 1166 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 AP4E1Q9UPM8 1137 aa12.29□□□□□ -0.44
EXOSC9-203ENST00000503139 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
EXOSC9-203ENST00000503139 ETF1P62495 437 aaKnown RBP12.28□□□□□ -0.44
EXOSC9-203ENST00000503139 TAB3Q8N5C8 712 aaPredicted RBP12.28□□□□□ -0.44
EXOSC9-203ENST00000503139 MKL1Q969V6 931 aa12.28□□□□□ -0.44
EXOSC9-203ENST00000503139 ATXN3LQ9H3M9 355 aa12.28□□□□□ -0.44
EXOSC9-203ENST00000503139 ACTR10Q9NZ32 417 aa12.28□□□□□ -0.44
EXOSC9-203ENST00000503139 NEFMP07197 916 aa12.27□□□□□ -0.45
EXOSC9-203ENST00000503139 DRD2P14416 443 aa12.27□□□□□ -0.45
EXOSC9-203ENST00000503139 MLECQ14165 292 aa12.27□□□□□ -0.45
EXOSC9-203ENST00000503139 BMS1Q14692 1282 aaKnown RBP12.27□□□□□ -0.45
EXOSC9-203ENST00000503139 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
EXOSC9-203ENST00000503139 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
EXOSC9-203ENST00000503139 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 GUCY2CP25092 1073 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 CDCP2Q5VXM1 449 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 ANKRD34AQ69YU3 496 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 Q6ZS46 218 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 C2CD4AQ8NCU7 369 aaPredicted RBP12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 LENG1Q96BZ8 264 aaPredicted RBP12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 CNNM2Q9H8M5 875 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 FBRSQ9HAH7 460 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 TJP2Q9UDY2 1190 aa12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 R3HCC1Q9Y3T6 440 aaKnown RBP12.26□□□□□ -0.45
EXOSC9-203ENST00000503139 ACRP10323 421 aa12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 NME1P15531 152 aaKnown RBP12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 COL8A1P27658 744 aa12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 NLRC3Q7RTR2 1065 aa12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 C12orf50Q8NA57 414 aaPredicted RBP12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 PICK1Q9NRD5 415 aa12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 ACTL7BQ9Y614 415 aa12.25□□□□□ -0.45
EXOSC9-203ENST00000503139 A0A1W2PQH9 124 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 TNFRSF10CO14798 259 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 NFE2L2Q16236 605 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 UBE3DQ7Z6J8 389 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 TTC6Q86TZ1 520 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 MCATQ8IVS2 390 aaKnown RBP12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 MRPL41Q8IXM3 137 aaKnown RBP12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 ZNF507Q8TCN5 953 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 AKTIPQ9H8T0 292 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 KLHL3Q9UH77 587 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 MSRB2Q9Y3D2 182 aa12.24□□□□□ -0.45
EXOSC9-203ENST00000503139 CHURC1-FNTBB4DL54 471 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 U2SURPO15042 1029 aaKnown RBP12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 ALX3O95076 343 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 RASA3Q14644 834 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 DDR2Q16832 855 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 DYMQ7RTS9 669 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 HID1Q8IV36 788 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 ISL2Q96A47 359 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 TMEM87BQ96K49 555 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 FAM105AQ9NUU6 356 aa12.23□□□□□ -0.45
EXOSC9-203ENST00000503139 PREPP48147 710 aa12.22□□□□□ -0.45
EXOSC9-203ENST00000503139 NKG7Q16617 165 aa12.22□□□□□ -0.45
EXOSC9-203ENST00000503139 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms