RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 STRIP2Q9ULQ0 834 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 SYNGAP1Q96PV0 1343 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 PRR36Q9H6K5 1346 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 ATE1O95260 518 aa9.72□□□□□ -0.85
NEDD4-203ENST00000502612 HCLS1P14317 486 aaPredicted RBP9.72□□□□□ -0.85
NEDD4-203ENST00000502612 GLB1P16278 677 aa9.72□□□□□ -0.85
NEDD4-203ENST00000502612 PLCG1P19174 1290 aa9.72□□□□□ -0.85
NEDD4-203ENST00000502612 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
NEDD4-203ENST00000502612 RUFY4Q6ZNE9 571 aa9.72□□□□□ -0.85
NEDD4-203ENST00000502612 LSRQ86X29 649 aaPredicted RBP9.72□□□□□ -0.85
NEDD4-203ENST00000502612 FBRSQ9HAH7 460 aa9.72□□□□□ -0.85
NEDD4-203ENST00000502612 FAM105AQ9NUU6 356 aa9.72□□□□□ -0.85
NEDD4-203ENST00000502612 PGRP06401 933 aa9.71□□□□□ -0.86
NEDD4-203ENST00000502612 GIPRP48546 466 aa9.71□□□□□ -0.86
NEDD4-203ENST00000502612 EIF6P56537 245 aaKnown RBP9.71□□□□□ -0.86
NEDD4-203ENST00000502612 ETF1P62495 437 aaKnown RBP9.71□□□□□ -0.86
NEDD4-203ENST00000502612 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.86
NEDD4-203ENST00000502612 UBL7Q96S82 380 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-203ENST00000502612 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
NEDD4-203ENST00000502612 APBA3O96018 575 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 MBTPS1Q14703 1052 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 ANKRD34AQ69YU3 496 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 Q6ZS46 218 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 RNF214Q8ND24 703 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 HNRNPLLQ8WVV9 542 aaKnown RBP9.7□□□□□ -0.86
NEDD4-203ENST00000502612 ARMC5Q96C12 935 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 ACSF2Q96CM8 615 aaPredicted RBP9.7□□□□□ -0.86
NEDD4-203ENST00000502612 GSX1Q9H4S2 264 aaPredicted RBP9.7□□□□□ -0.86
NEDD4-203ENST00000502612 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
NEDD4-203ENST00000502612 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 C9orf172C9J069 976 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
NEDD4-203ENST00000502612 ASPAP45381 313 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 RBL2Q08999 1139 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 NKG7Q16617 165 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 OVOS1Q6IE37 1185 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 ANKS3Q6ZW76 656 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 ISL2Q96A47 359 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 LNPKQ9C0E8 428 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 ATXN3LQ9H3M9 355 aa9.69□□□□□ -0.86
NEDD4-203ENST00000502612 UPK3BL1B0FP48 263 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 UPK3BL2E5RIL1 263 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 RNGTTO60942 597 aaKnown RBP9.68□□□□□ -0.86
NEDD4-203ENST00000502612 RAB6AP20340 208 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 PDE4BQ07343 736 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 ADGRE1Q14246 886 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 MEGF10Q96KG7 1140 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 CRBNQ96SW2 442 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 DPH2Q9BQC3 489 aaPredicted RBP9.68□□□□□ -0.86
NEDD4-203ENST00000502612 TJP2Q9UDY2 1190 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 TACC3Q9Y6A5 838 aa9.68□□□□□ -0.86
NEDD4-203ENST00000502612 KRBA1A5PL33 1030 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 SLC22A31A6NKX4 558 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 CHURC1-FNTBB4DL54 471 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 FANCGO15287 622 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 CHRNA4P43681 627 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 DPH6Q7L8W6 267 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 RBBP8NLQ8NC74 664 aaPredicted RBP9.67□□□□□ -0.86
NEDD4-203ENST00000502612 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 PIDD1Q9HB75 910 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 PRKAG3Q9UGI9 489 aa9.67□□□□□ -0.86
NEDD4-203ENST00000502612 MEIS3P2A8K0S8 358 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 IMPDH2P12268 514 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 SGO2Q562F6 1265 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 TMEM201Q5SNT2 666 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 FAM46AQ96IP4 442 aaKnown RBP9.66□□□□□ -0.86
NEDD4-203ENST00000502612 TNKS2Q9H2K2 1166 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 GMIPQ9P107 970 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 ADAM30Q9UKF2 790 aa9.66□□□□□ -0.86
NEDD4-203ENST00000502612 FAM86C2PA6NEL3 165 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
NEDD4-203ENST00000502612 KLF4O43474 513 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 GAS2O43903 313 aaKnown RBP9.65□□□□□ -0.86
NEDD4-203ENST00000502612 NRG1Q02297 640 aaPredicted RBP9.65□□□□□ -0.86
NEDD4-203ENST00000502612 ARSHQ5FYA8 562 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 CKAP2LQ8IYA6 745 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 ATG4CQ96DT6 458 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 TMEM87BQ96K49 555 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 HIRIP3Q9BW71 556 aaPredicted RBP9.65□□□□□ -0.86
NEDD4-203ENST00000502612 CEP41Q9BYV8 373 aa9.65□□□□□ -0.86
NEDD4-203ENST00000502612 RBAK-RBAKDNI3L0D1 243 aa9.64□□□□□ -0.87
NEDD4-203ENST00000502612 ACRP10323 421 aa9.64□□□□□ -0.87
NEDD4-203ENST00000502612 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
NEDD4-203ENST00000502612 SLBPQ14493 270 aaKnown RBP eCLIP9.64□□□□□ -0.87
NEDD4-203ENST00000502612 SMYD4Q8IYR2 804 aaPredicted RBP9.64□□□□□ -0.87
NEDD4-203ENST00000502612 FAM13CQ8NE31 585 aa9.64□□□□□ -0.87
NEDD4-203ENST00000502612 ZNF507Q8TCN5 953 aa9.64□□□□□ -0.87
NEDD4-203ENST00000502612 FBLIM1Q8WUP2 373 aa9.64□□□□□ -0.87
NEDD4-203ENST00000502612 ZYXQ15942 572 aaKnown RBP9.63□□□□□ -0.87
NEDD4-203ENST00000502612 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 CD163Q86VB7 1156 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 TXNRD3Q86VQ6 643 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 HID1Q8IV36 788 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 MCATQ8IVS2 390 aaKnown RBP9.63□□□□□ -0.87
NEDD4-203ENST00000502612 ARMC10Q8N2F6 343 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 OR6P1Q8NGX9 317 aa9.63□□□□□ -0.87
NEDD4-203ENST00000502612 DCAF5Q96JK2 942 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms