RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CSADQ9Y600 493 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 UBE2Q2LH0YL09 131 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 CA12O43570 354 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 MBD4O95243 580 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 USP5P45974 858 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 CYP4F22Q6NT55 531 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 LCORLQ8N3X6 602 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 WRNIP1Q96S55 665 aa12.9□□□□□ -0.34
UBE2D3-212ENST00000502563 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 NAV1Q8NEY1 1877 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 PPATQ06203 517 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 GABPAQ06546 454 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 VGLL4Q14135 290 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 SBK1Q52WX2 424 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 TTC22Q5TAA0 569 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 TATDN1Q6P1N9 297 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 ERO1BQ86YB8 467 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 BCL11AQ9H165 835 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 ARPP21Q9UBL0 812 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 MYH1P12882 1939 aa12.89□□□□□ -0.35
UBE2D3-212ENST00000502563 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 GPAA1O43292 621 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 TM4SF4P48230 202 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 EVX2Q03828 476 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 ARMT1Q9H993 441 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 SAGE1Q9NXZ1 904 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 SNCAIPQ9Y6H5 919 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
UBE2D3-212ENST00000502563 PCNTO95613 3336 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 NT5C2P49902 561 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 PPIL2Q13356 520 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 MIGA2Q7L4E1 593 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 DNAJC18Q9H819 358 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 PALD1Q9ULE6 856 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 KCNH4Q9UQ05 1017 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 RAD50Q92878 1312 aa12.87□□□□□ -0.35
UBE2D3-212ENST00000502563 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 CXCL11O14625 94 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 ALDH1A1P00352 501 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 ASNSP08243 561 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 GSPT1P15170 499 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 SDSP20132 328 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 CAP2P40123 477 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 ALX1Q15699 326 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 SDR42E1Q8WUS8 393 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 CLMNQ96JQ2 1002 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 SLC4A4Q9Y6R1 1079 aa12.86□□□□□ -0.35
UBE2D3-212ENST00000502563 CHGBP05060 677 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 INPP5BP32019 993 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 GTF2A2P52657 109 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 PRKG1Q13976 671 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 OPTNQ96CV9 577 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 FZD1Q9UP38 647 aa12.85□□□□□ -0.35
UBE2D3-212ENST00000502563 M0R2C6 588 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 PTPRAP18433 802 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 PLCD1P51178 756 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 KIF23Q02241 960 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 CRACR2BQ8N4Y2 399 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 ZKSCAN4Q969J2 545 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 CCDC17Q96LX7 622 aa12.84□□□□□ -0.35
UBE2D3-212ENST00000502563 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms